RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 VAMP7P51809 220 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 PPP3CAQ08209 521 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 MRPL58Q14197 206 aaKnown RBP15.44■□□□□ 0.06
CBWD3-217ENST00000621474 RSPO2Q6UXX9 243 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-217ENST00000621474 LRRC52Q8N7C0 313 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 RIN2Q8WYP3 895 aaPredicted RBP15.44■□□□□ 0.06
CBWD3-217ENST00000621474 KLHL5Q96PQ7 755 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 RWDD2AQ9UIY3 292 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 AGAP1Q9UPQ3 857 aa15.44■□□□□ 0.06
CBWD3-217ENST00000621474 IKBKBO14920 756 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 SYN3O14994 580 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 SLC16A3O15427 465 aaKnown RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 CLASP2O75122 1294 aaKnown RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TNNC2P02585 160 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 KRT19P08727 400 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 LTBRP36941 435 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TAF6P49848 677 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 ENPEPQ07075 957 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 DLX2Q07687 328 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 ZACNQ401N2 412 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 SENP8Q96LD8 212 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 CLSTN3Q9BQT9 956 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 XYLT2Q9H1B5 865 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TLE6Q9H808 572 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TIMM13Q9Y5L4 95 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 KPNA7A9QM74 516 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 ADAM12O43184 909 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TBC1D4O60343 1298 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 TBX10O75333 385 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 VNN1O95497 513 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 EPB41P11171 864 aaKnown RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 CA8P35219 290 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
CBWD3-217ENST00000621474 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 FILIP1Q7Z7B0 1213 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 EFHBQ8N7U6 833 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 ZNF560Q96MR9 790 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 IGFLR1Q9H665 355 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 MTRRQ9UBK8 725 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 HCFC2Q9Y5Z7 792 aa15.43■□□□□ 0.06
CBWD3-217ENST00000621474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 CLCN4P51793 760 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 RBP5P82980 135 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 ADAM15Q13444 863 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 BMS1Q14692 1282 aaKnown RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 PSMD5Q16401 504 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 SLC35C1Q96A29 364 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 PABPC5Q96DU9 382 aaKnown RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 CDCA3Q99618 268 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 SRRTQ9BXP5 876 aaKnown RBP15.42■□□□□ 0.06
CBWD3-217ENST00000621474 SSX2IPQ9Y2D8 614 aa15.42■□□□□ 0.06
CBWD3-217ENST00000621474 LRRN2O75325 713 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 OAZ2O95190 189 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 CYP11A1P05108 521 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 PNPLA4P41247 253 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 GCLMP48507 274 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 AP3M2P53677 418 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 MARSP56192 900 aaKnown RBP15.41■□□□□ 0.06
CBWD3-217ENST00000621474 MYL6P60660 151 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 SV2CQ496J9 727 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 TMEM184AQ6ZMB5 413 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 ANKS3Q6ZW76 656 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 LIMS2Q7Z4I7 341 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 IRF2BP1Q8IU81 584 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 GLYCTKQ8IVS8 523 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 SLC22A17Q8WUG5 538 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 PPP2R3CQ969Q6 453 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 ELMO3Q96BJ8 720 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.41■□□□□ 0.06
CBWD3-217ENST00000621474 GDAP2Q9NXN4 497 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 CLEC1BQ9P126 229 aa15.41■□□□□ 0.06
CBWD3-217ENST00000621474 C2orf16Q68DN1 1984 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 CYB561D2O14569 222 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 SLC34A2O95436 690 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 KRT13P13646 458 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 EPCAMP16422 314 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 TYMPP19971 482 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 PAX3P23760 479 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 ERCC5P28715 1186 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-217ENST00000621474 CBWD6Q4V339 395 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 CBWD3Q5JTY5 395 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 CBWD5Q5RIA9 395 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 SLC8B1Q6J4K2 584 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 FEZF2Q8TBJ5 459 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 RTP3Q9BQQ7 232 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 FUCA2Q9BTY2 467 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 EMILIN2Q9BXX0 1053 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 VRTNQ9H8Y1 702 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 CLDND1Q9NY35 253 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-217ENST00000621474 L1RE1Q9UN81 338 aa15.4■□□□□ 0.06
CBWD3-217ENST00000621474 BACE2Q9Y5Z0 518 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms