RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ACCSQ96QU6 501 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 TSPAN18Q96SJ8 248 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 OLFML3Q9NRN5 406 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 PANK4Q9NVE7 773 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 INSL5Q9Y5Q6 135 aa18.62■□□□□ 0.57
HMGN3-203ENST00000620514 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.62■□□□□ 0.57
HMGN3-203ENST00000620514 ZFP37Q9Y6Q3 630 aaPredicted RBP18.62■□□□□ 0.57
HMGN3-203ENST00000620514 ANK1P16157 1881 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 OAZ2O95190 189 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 F13A1P00488 732 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 LRG1P02750 347 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 SRFP11831 508 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 CPB1P15086 417 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 PTPN5P54829 565 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 WNT7BP56706 349 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 LILRA4P59901 499 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 YWHAHQ04917 246 aaPredicted RBP18.61■□□□□ 0.57
HMGN3-203ENST00000620514 E2F4Q16254 413 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 TPGS2Q68CL5 300 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 ASTLQ6HA08 431 aaPredicted RBP18.61■□□□□ 0.57
HMGN3-203ENST00000620514 POTEHQ6S545 545 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 RNF19BQ6ZMZ0 732 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 ALYREFQ86V81 257 aaKnown RBP18.61■□□□□ 0.57
HMGN3-203ENST00000620514 NPAS3Q8IXF0 933 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 PHOX2BQ99453 314 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 ASB7Q9H672 318 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 AFF4Q9UHB7 1163 aaKnown RBP18.61■□□□□ 0.57
HMGN3-203ENST00000620514 DERAQ9Y315 318 aa18.61■□□□□ 0.57
HMGN3-203ENST00000620514 KRBA1A5PL33 1030 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 PIRO00625 290 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 PI15O43692 258 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 CUTAO60888 179 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 VNN2O95498 520 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 POSTNQ15063 836 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 EFCAB13Q8IY85 973 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 GPR152Q8TDT2 470 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 HPS3Q969F9 1004 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 DHX58Q96C10 678 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 SAAL1Q96ER3 474 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 SENP8Q96LD8 212 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 PGLYRP2Q96PD5 576 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 PRRX2Q99811 253 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 CORO1BQ9BR76 489 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 FAM213AQ9BRX8 229 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 WNT16Q9UBV4 365 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 KCNH3Q9ULD8 1083 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 CA14Q9ULX7 337 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 EXOC7Q9UPT5 735 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 MRPS23Q9Y3D9 190 aaKnown RBP18.6■□□□□ 0.57
HMGN3-203ENST00000620514 PCDHB13Q9Y5F0 798 aa18.6■□□□□ 0.57
HMGN3-203ENST00000620514 ANO9A1A5B4 782 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TULP1O00294 542 aaPredicted RBP18.59■□□□□ 0.57
HMGN3-203ENST00000620514 NRG2O14511 850 aaPredicted RBP18.59■□□□□ 0.57
HMGN3-203ENST00000620514 PRPF6O94906 941 aaKnown RBP18.59■□□□□ 0.57
HMGN3-203ENST00000620514 CEBPBP17676 345 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 PTPN2P17706 415 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TYMPP19971 482 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 KCNA4P22459 653 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TWF1Q12792 350 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 USP37Q86T82 979 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 SYCP3Q8IZU3 236 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TCEAL4Q96EI5 215 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 MCRS1Q96EZ8 462 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TMEM209Q96SK2 561 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 TNMDQ9H2S6 317 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 KBTBD4Q9NVX7 518 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 DPP3Q9NY33 737 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 C2CD2Q9Y426 696 aa18.59■□□□□ 0.57
HMGN3-203ENST00000620514 GOLGA8IPA6NC78 632 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 GOLGA8JA6NMD2 632 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 GALR2O43603 387 aaPredicted RBP18.58■□□□□ 0.56
HMGN3-203ENST00000620514 CLCN5P51795 746 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 GPC5P78333 572 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 PRSS36Q5K4E3 855 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 OVOS1Q6IE37 1185 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 CCDC65Q8IXS2 484 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 HS6ST3Q8IZP7 471 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 FAM84AQ96KN4 292 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 KXD1Q9BQD3 176 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 CBWD1Q9BRT8 395 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 TRIM9Q9C026 710 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 CRISPLD1Q9H336 500 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 PCIF1Q9H4Z3 704 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 AVENQ9NQS1 362 aaPredicted RBP18.58■□□□□ 0.56
HMGN3-203ENST00000620514 FAM86C1Q9NVL1 165 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 CEP72Q9P209 647 aa18.58■□□□□ 0.56
HMGN3-203ENST00000620514 SCN1AP35498 2009 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 OR6C75A6NL08 312 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 IL18RAPO95256 599 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 ODC1P11926 461 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 AOC1P19801 751 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 CCR2P41597 374 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 POU5F1Q01860 360 aaKnown RBP18.57■□□□□ 0.56
HMGN3-203ENST00000620514 ALCAMQ13740 583 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 MTSS1LQ765P7 747 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 BRSK2Q8IWQ3 736 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 SLC2A4RGQ9NR83 387 aa18.57■□□□□ 0.56
HMGN3-203ENST00000620514 MAFFQ9ULX9 164 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms