RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 RGL2O15211 777 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 FGFR1P11362 822 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 KRT4P19013 534 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 GCKP35557 465 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
DKC1-213ENST00000620277 SETDB1Q15047 1291 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 NAIF1Q69YI7 327 aaPredicted RBP16.99■□□□□ 0.31
DKC1-213ENST00000620277 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 OR5B17Q8NGF7 314 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 DTX3LQ8TDB6 740 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
DKC1-213ENST00000620277 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
DKC1-213ENST00000620277 FAM47DPA6NHR8 397 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 GGPS1O95749 300 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 APBA3O96018 575 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 BBS9Q3SYG4 887 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 RHBDF2Q6PJF5 856 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 LONP2Q86WA8 852 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 LRRC8CQ8TDW0 803 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 UTP4Q969X6 686 aaKnown RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 LRRC37BQ96QE4 947 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ROPN1BQ9BZX4 212 aaPredicted RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 ROPN1Q9HAT0 212 aaPredicted RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 MYPNQ86TC9 1320 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 RAD23BP54727 409 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 STRN3Q13033 797 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 TDRD10Q5VZ19 366 aaKnown RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 LVRNQ6Q4G3 990 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 FBF1Q8TES7 1133 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 APOBEC3GQ9HC16 384 aaKnown RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 CFAP69A5D8W1 941 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ADRA1DP25100 572 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 PSMC5P62195 406 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ANKRD20A2Q5SQ80 823 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ANKRD20A1Q5TYW2 823 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ANKRD20A3Q5VUR7 823 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 MTDHQ86UE4 582 aaKnown RBP16.98■□□□□ 0.31
DKC1-213ENST00000620277 EMC1Q8N766 993 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 IFT74Q96LB3 600 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 SMC6Q96SB8 1091 aa16.98■□□□□ 0.31
DKC1-213ENST00000620277 ZNF536O15090 1300 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 ATP5DP30049 168 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 PCK1P35558 622 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 MAMLD1Q13495 774 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 TFDP1Q14186 410 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 TAF1BQ53T94 588 aaPredicted RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 BZW1Q7L1Q6 419 aaKnown RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 GPD1LQ8N335 351 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 CCDC89Q8N998 374 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 P3H4Q92791 437 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 MAK16Q9BXY0 300 aaKnown RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 QTRT2Q9H974 415 aaKnown RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 AGTPBP1Q9UPW5 1226 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 TTLL13PA6NNM8 815 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 UNGP13051 313 aaPredicted RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 ATP2A2P16615 1042 aaKnown RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 NFX1Q12986 1120 aaKnown RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 PTK6Q13882 451 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 ZNF268Q14587 947 aaPredicted RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 RHOT1Q8IXI2 618 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 CLEC4DQ8WXI8 215 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 PRR11Q96HE9 360 aaPredicted RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
DKC1-213ENST00000620277 DONSONQ9NYP3 566 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 EXOC7Q9UPT5 735 aa16.97■□□□□ 0.31
DKC1-213ENST00000620277 SLC26A4O43511 780 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 ZBED4O75132 1171 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 CD19P15391 556 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 RFX1P22670 979 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 PGM5Q15124 567 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 NFIL3Q16649 462 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 TLDC1Q6P9B6 456 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
DKC1-213ENST00000620277 GRK7Q8WTQ7 553 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 ZBTB10Q96DT7 871 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
DKC1-213ENST00000620277 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 CFAP73A6NFT4 308 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 PROSCO94903 275 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 EGFRP00533 1210 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 GTF2H1P32780 548 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 HADHBP55084 474 aaKnown RBP16.96■□□□□ 0.31
DKC1-213ENST00000620277 IRX4P78413 519 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 MTMR2Q13614 643 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 CLUL1Q15846 466 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 ANKRD22Q5VYY1 191 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 RHPN2Q8IUC4 686 aa16.96■□□□□ 0.31
DKC1-213ENST00000620277 RBBP8NLQ8NC74 664 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms