RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 TADA2AO75478 443 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 B3GAT3O94766 335 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 VNN1O95497 513 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 BMP8BP34820 402 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 STAT1P42224 750 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 CLCNKBP51801 687 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 LILRA4P59901 499 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 HTRA4P83105 476 aaPredicted RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 RAPGEF1Q13905 1077 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 C16orf59Q7L2K0 433 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 COLGALT2Q8IYK4 626 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 STK33Q9BYT3 514 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 DNAJC12Q9UKB3 198 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 BZW2Q9Y6E2 419 aaKnown RBP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 PDE4DIPQ5VU43 2346 aa11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNORD3D-201ENST00000619178 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 FERP16591 822 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 LHX1P48742 406 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 MLLT1Q03111 559 aaPredicted RBP11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 KRT17Q04695 432 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SOX4Q06945 474 aaPredicted RBP11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 LRMPQ12912 555 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 CUL2Q13617 745 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 NAB2Q15742 525 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 FAM117BQ6P1L5 589 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 THEM5Q8N1Q8 247 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 OR8K1Q8NGG5 319 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SYN2Q92777 582 aaPredicted RBP11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 TMEM169Q96HH4 297 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SNX25Q9H3E2 840 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 ADAM28Q9UKQ2 775 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SSX2IPQ9Y2D8 614 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
SNORD3D-201ENST00000619178 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 NRP1O14786 923 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 SYN3O14994 580 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 AP5Z1O43299 807 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 TACC1O75410 805 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 DDHD2O94830 711 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 CASP14P31944 242 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 KRT9P35527 623 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 BCAR1P56945 870 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 PTK2Q05397 1052 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 RAB30Q15771 203 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 ARHGAP44Q17R89 818 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 PHLDB3Q6NSJ2 640 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 KCNT2Q6UVM3 1135 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 UNC93AQ86WB7 457 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 SPC24Q8NBT2 197 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 CCDC112Q8NEF3 446 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 GDF15Q99988 308 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 PI4K2AQ9BTU6 479 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 NAA15Q9BXJ9 866 aaKnown RBP11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 GANQ9H2C0 597 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 GOLGA2P5Q9HBQ8 144 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 NLRC4Q9NPP4 1024 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 SPG21Q9NZD8 308 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 MSRAQ9UJ68 235 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 KIAA1257Q9ULG3 409 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
SNORD3D-201ENST00000619178 CEP290O15078 2479 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 H7C4K7 107 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 CYB561D2O14569 222 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 MED7O43513 233 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 MFAP3LO75121 409 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 GYPCP04921 128 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 GALTP07902 379 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 KRT5P13647 590 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 TYMPP19971 482 aa11.8□□□□□ -0.52
SNORD3D-201ENST00000619178 PCSK1P29120 753 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms