RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 CITO14578 2027 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 K7ERI5 159 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PDXKO00764 312 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 NRP1O14786 923 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 LILRB3O75022 631 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PRPF6O94906 941 aaKnown RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 URODP06132 367 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 KCNA4P22459 653 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 OR1G1P47890 313 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PTENP60484 403 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 NTHL1P78549 312 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 FKBP3Q00688 224 aaKnown RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 MYBPC2Q14324 1141 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 UBXN2BQ14CS0 331 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PCBP1Q15365 356 aaKnown RBP eCLIP10.03□□□□□ -0.8
SYN3-213ENST00000619146 MAPK6Q16659 721 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 ZCWPW2Q504Y3 356 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 ZC2HC1CQ53FD0 456 aaPredicted RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 TTI2Q6NXR4 508 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 ZC3H14Q6PJT7 736 aaKnown RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 IFNLR1Q8IU57 520 aaPredicted RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 NELFCDQ8IXH7 590 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 MAML2Q8IZL2 1156 aaPredicted RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 AOPEPQ8N6M6 819 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 SUMF1Q8NBK3 374 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 GLIS3Q8NEA6 775 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PJA1Q8NG27 643 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 URGCPQ8TCY9 931 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 KIFC3Q9BVG8 833 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 KCTD10Q9H3F6 313 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 SEMA4AQ9H3S1 761 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 MARCH5Q9NX47 278 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 DLGAP2Q9P1A6 1054 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 TRAF3IP3Q9Y228 551 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 MTF2Q9Y483 593 aaPredicted RBP10.03□□□□□ -0.8
SYN3-213ENST00000619146 NFE2L3Q9Y4A8 694 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 NUMBLQ9Y6R0 609 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 LAMA1P25391 3075 aa10.03□□□□□ -0.8
SYN3-213ENST00000619146 CEP295Q9C0D2 2601 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 GNA14O95837 355 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 GLUD1P00367 558 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 ALDH2P05091 517 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYN3-213ENST00000619146 HOXD13P35453 343 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 ATXN1P54253 815 aaKnown RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 STX17P56962 302 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 GPC5P78333 572 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 CSTF1Q05048 431 aaKnown RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 NCAPHQ15003 741 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 LPAL2Q16609 132 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 NFIL3Q16649 462 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 ANKRD40Q6AI12 368 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 SLFN12LQ6IEE8 588 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 ZPBP2Q6X784 338 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 C15orf39Q6ZRI6 1047 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 SRGAP1Q7Z6B7 1085 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 MAP4K3Q8IVH8 894 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 FAM114A1Q8IWE2 563 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 ANKRD20A12PQ8NF67 263 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 FGF14Q92915 247 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 ZNF707Q96C28 371 aaPredicted RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 CEP63Q96MT8 703 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 RPS6KC1Q96S38 1066 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 APOL6Q9BWW8 343 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 INO80BQ9C086 356 aaPredicted RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 RSAD1Q9HA92 442 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
SYN3-213ENST00000619146 USP18Q9UMW8 372 aa10.02□□□□□ -0.81
SYN3-213ENST00000619146 INO80B-WBP1J3KQ70 363 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 HNRNPDLO14979 420 aaKnown RBP10.01□□□□□ -0.81
SYN3-213ENST00000619146 KIAA0391O15091 583 aaKnown RBP10.01□□□□□ -0.81
SYN3-213ENST00000619146 CETN3O15182 167 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 TGFB1I1O43294 461 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 PIGRP01833 764 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 NR3C1P04150 777 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 ADH1AP07327 375 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 LAMP2P13473 410 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 GLUD2P49448 558 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 LIG4P49917 911 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 PMS1P54277 932 aaKnown RBP10.01□□□□□ -0.81
SYN3-213ENST00000619146 SPAG1Q07617 926 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 NCBP1Q09161 790 aaKnown RBP10.01□□□□□ -0.81
SYN3-213ENST00000619146 KCNA1Q09470 495 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 HTR4Q13639 388 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 PARM1Q6UWI2 310 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 C12orf56Q8IXR9 622 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 PGBD4Q96DM1 585 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 BICD1Q96G01 975 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 PRIMPOLQ96LW4 560 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 MED15Q96RN5 788 aa10.01□□□□□ -0.81
SYN3-213ENST00000619146 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms