RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GOLGA8JA6NMD2 632 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 ADAM12O43184 909 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 VARS2Q5ST30 1063 aaKnown RBP17.33■□□□□ 0.36
BRCA1-228ENST00000618469 SPATA1Q5VX52 437 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
BRCA1-228ENST00000618469 ANKS3Q6ZW76 656 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 EPM2AIP1Q7L775 607 aaPredicted RBP17.33■□□□□ 0.36
BRCA1-228ENST00000618469 BRSK2Q8IWQ3 736 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 NELFCDQ8IXH7 590 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 FLCNQ8NFG4 579 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 SUSD3Q96L08 255 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 PCIF1Q9H4Z3 704 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 ASB7Q9H672 318 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 EXOC1Q9NV70 894 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 RBAKQ9NYW8 714 aaPredicted RBP17.33■□□□□ 0.36
BRCA1-228ENST00000618469 FBXW11Q9UKB1 542 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 DERAQ9Y315 318 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 C2CD2Q9Y426 696 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 FAM237AA0A1B0GTK4 181 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 PPEF2O14830 753 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 SYN3O14994 580 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 PI15O43692 258 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 RFPL2O75678 378 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 IL18RAPO95256 599 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 HOXD13P35453 343 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 EFCAB13Q8IY85 973 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 UBALD2Q8IYN6 164 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 SCFD1Q8WVM8 642 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
BRCA1-228ENST00000618469 KLRC4O43908 158 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 EXTL3O43909 919 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 LDHAP00338 332 aaKnown RBP17.31■□□□□ 0.36
BRCA1-228ENST00000618469 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 OR1D2P34982 312 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 WNT7BP56706 349 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 POU5F1Q01860 360 aaKnown RBP17.31■□□□□ 0.36
BRCA1-228ENST00000618469 ATAT1Q5SQI0 421 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF280DQ6N043 979 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 LILRA6Q6PI73 481 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 RSPO2Q6UXX9 243 aaPredicted RBP17.31■□□□□ 0.36
BRCA1-228ENST00000618469 GPR149Q86SP6 731 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 GPD1LQ8N335 351 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 CMASQ8NFW8 434 aaPredicted RBP17.31■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF507Q8TCN5 953 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 BACE2Q9Y5Z0 518 aa17.31■□□□□ 0.36
BRCA1-228ENST00000618469 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
BRCA1-228ENST00000618469 C1RP00736 705 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 KMT5BQ4FZB7 885 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 DSTYKQ6XUX3 929 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 C15orf39Q6ZRI6 1047 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 CCDC149Q6ZUS6 474 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 APPL2Q8NEU8 664 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 HDAC7Q8WUI4 952 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 AGPAT3Q9NRZ7 376 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
BRCA1-228ENST00000618469 CCDC195A0A1B0GUA6 201 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 GOLGA6L4A6NEF3 574 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 H7C4K7 107 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 M0QZQ0 153 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 MYL1P05976 194 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 C8AP07357 584 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 AARSP49588 968 aaKnown RBP eCLIP17.29■□□□□ 0.36
BRCA1-228ENST00000618469 NUBP1P53384 320 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 ARPP19P56211 112 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 TFAMQ00059 246 aaKnown RBP17.29■□□□□ 0.36
BRCA1-228ENST00000618469 ROR1Q01973 937 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 RAB33AQ14088 237 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 BMT2Q1RMZ1 405 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 CTXN3Q4LDR2 81 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 KRBA2Q6ZNG9 492 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 HS2ST1Q7LGA3 356 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 KIAA0895Q8NCT3 520 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF707Q96C28 371 aaPredicted RBP17.29■□□□□ 0.36
BRCA1-228ENST00000618469 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 ZDHHC7Q9NXF8 308 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 DPP3Q9NY33 737 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 TIMM13Q9Y5L4 95 aaPredicted RBP17.29■□□□□ 0.36
BRCA1-228ENST00000618469 SCN1AP35498 2009 aa17.29■□□□□ 0.36
BRCA1-228ENST00000618469 CLIC2O15247 247 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 ZMYND10O75800 440 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 ZNF202O95125 648 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 RPN1P04843 607 aaKnown RBP17.28■□□□□ 0.36
BRCA1-228ENST00000618469 ODC1P11926 461 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 CYP2J2P51589 502 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 YWHAHQ04917 246 aaPredicted RBP17.28■□□□□ 0.36
BRCA1-228ENST00000618469 STK4Q13043 487 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 PPM1LQ5SGD2 360 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 CWF19L1Q69YN2 538 aaKnown RBP17.28■□□□□ 0.36
BRCA1-228ENST00000618469 SLC8B1Q6J4K2 584 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 ERMP1Q7Z2K6 904 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 CBWD2Q8IUF1 395 aa17.28■□□□□ 0.36
BRCA1-228ENST00000618469 TDRD5Q8NAT2 981 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms