RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 MREGQ8N565 214 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 EXD1Q8NHP7 514 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 THOC1Q96FV9 657 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 FAM49AQ9H0Q0 323 aaPredicted RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 KDM4CQ9H3R0 1056 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 XPO7Q9UIA9 1087 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 MTO1Q9Y2Z2 717 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 A8MXQ7 604 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 O00370 1275 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 ACTR2P61160 394 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CYP24A1Q07973 514 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 MTHFD1LQ6UB35 978 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 PPP1R16BQ96T49 567 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CGRRF1Q99675 332 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 TRIM15Q9C019 465 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 DRC3Q9H069 523 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 DHX35Q9H5Z1 703 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 PROSCO94903 275 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 STIP1P31948 543 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 KCNJ1P48048 391 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 AMPD2Q01433 879 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 ACTN3Q08043 901 aaPredicted RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 TMEM132DQ14C87 1099 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CCNG2Q16589 344 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 ATF7IP2Q5U623 682 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 NT5DC3Q86UY8 548 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CBWD2Q8IUF1 395 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 SDCCAG3Q96C92 435 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 DNAJC19Q96DA6 116 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CBWD1Q9BRT8 395 aa9.35□□□□□ -0.91
PCDH15-229ENST00000616114 CPSF3Q9UKF6 684 aaKnown RBP9.35□□□□□ -0.91
PCDH15-229ENST00000616114 FRMD3A2A2Y4 597 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 HBP1O60381 514 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 RPS6KA5O75582 802 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GHRP10912 638 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GRM1Q13255 1194 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 C1orf228Q6PIY5 440 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ANKMY2Q8IV38 441 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 KRT35Q92764 455 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 VCPIP1Q96JH7 1222 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 TTC1Q99614 292 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 CENPKQ9BS16 269 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 TSSK1BQ9BXA7 367 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 SLC40A1Q9NP59 571 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 TXNP10599 105 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GEMIN4P57678 1058 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 JADE1Q6IE81 842 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 HAUS8Q9BT25 410 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 KIAA1257Q9ULG3 409 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 FAM86B1E9PN63 330 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 POLRMTO00411 1230 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 DDX3XO00571 662 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 FAM86B2P0C5J1 330 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ACADSBP45954 432 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 MAGEB18Q96M61 343 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 SH2D3AQ9BRG2 576 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 AGAP1Q9UPQ3 857 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 MED1Q15648 1581 aaPredicted RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 KCNN4O15554 427 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 NPM3O75607 178 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 SUPT20HL2P0C7V6 817 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 APOBEC3HQ6NTF7 200 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 KCNK18Q7Z418 384 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 RASSF3Q86WH2 238 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 KIRREL3Q8IZU9 778 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 BAP1Q92560 729 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 HAS1Q92839 578 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ATG4CQ96DT6 458 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 MED15Q96RN5 788 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 MAGEB5Q9BZ81 275 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 VPS11Q9H270 941 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 OSGEPQ9NPF4 335 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GPD1P21695 349 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 GCNT1Q02742 428 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 RBBP5Q15291 538 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 HP1BP3Q5SSJ5 553 aaPredicted RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 C1orf146Q5VVC0 180 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ZC3H18Q86VM9 953 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 DDX4Q9NQI0 724 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ZC3H7BQ9UGR2 993 aaKnown RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
PCDH15-229ENST00000616114 OGTO15294 1046 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms