RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DEAF1O75398 565 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CLCN6P51797 869 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 DYDC2Q96IM9 177 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 ECE2O60344 883 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CETPP11597 493 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 SP100P23497 879 aaPredicted RBP13.22□□□□□ -0.29
TCF4-248ENST00000616053 CHMLP26374 656 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 SOX11P35716 441 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 P3H2Q8IVL5 708 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 DSELQ8IZU8 1212 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 PTPRN2Q92932 1015 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 ERLEC1Q96DZ1 483 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 PIGUQ9H490 435 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 HIST1H2ABP04908 130 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 PSEN2P49810 448 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 KCNQ4P56696 695 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 HIST3H2AQ7L7L0 130 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 CYP4Z1Q86W10 505 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 HIST1H2ACQ93077 130 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
TCF4-248ENST00000616053 RASGRP1O95267 797 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 IFNA16P05015 189 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 TRIM72Q6ZMU5 477 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 ZNF512BQ96KM6 892 aaPredicted RBP13.21□□□□□ -0.29
TCF4-248ENST00000616053 SH3GL2Q99962 352 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 TBC1D22BQ9NU19 505 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 PCSK1P29120 753 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 AK8Q96MA6 479 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 NFIBO00712 420 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 CENPCQ03188 943 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 USP41Q3LFD5 358 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 NUGGCQ68CJ6 796 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 SETD3Q86TU7 594 aaPredicted RBP13.21□□□□□ -0.29
TCF4-248ENST00000616053 PIGOQ8TEQ8 1089 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 KLHL28Q9NXS3 571 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 SUCOQ9UBS9 1254 aaKnown RBP13.21□□□□□ -0.29
TCF4-248ENST00000616053 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 LYNP07948 512 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 GATAD2AQ86YP4 633 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 MCCC2Q9HCC0 563 aa13.21□□□□□ -0.29
TCF4-248ENST00000616053 MYO1CO00159 1063 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.3
TCF4-248ENST00000616053 POMCP01189 267 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 CACNB3P54284 484 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 KIAA1324Q6UXG2 1013 aaKnown RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 ICA1LQ8NDH6 482 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 FAM45AQ8TCE6 357 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 RASGRP4Q8TDF6 673 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 SPRTNQ9H040 489 aaPredicted RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 SNX14Q9Y5W7 946 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 ANO5Q75V66 913 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 THOC1Q96FV9 657 aaKnown RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 ACOX2Q99424 681 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 OMDQ99983 421 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 HEMGNQ9BXL5 484 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 CYP4F11Q9HBI6 524 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 MRPL39Q9NYK5 338 aaKnown RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 ZNF112Q9UJU3 913 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 A0A087WUV0 522 aaPredicted RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 GH1P01241 217 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 CPA3P15088 417 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.3
TCF4-248ENST00000616053 SLC9A7Q96T83 725 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 RGS18Q9NS28 235 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 SLC9A2Q9UBY0 812 aa13.21□□□□□ -0.3
TCF4-248ENST00000616053 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 XYLBO75191 536 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GNA15P30679 374 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GRK4P32298 578 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 CRKP46108 304 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 CLK1P49759 484 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 FKBP3Q00688 224 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 STX3Q13277 289 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GNA13Q14344 377 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ELF2Q15723 593 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 RPTNQ6XPR3 784 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 MED15Q96RN5 788 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 TDRKHQ9Y2W6 561 aaKnown RBP13.2□□□□□ -0.3
TCF4-248ENST00000616053 SLC20A1Q8WUM9 679 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 RLBP1P12271 317 aa13.2□□□□□ -0.3
TCF4-248ENST00000616053 ALDH9A1P49189 494 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms