RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 PNKPQ96T60 521 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 DUSP26Q9BV47 211 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 ALOXE3Q9BYJ1 711 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC13A1Q9BZW2 595 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 GALNT9Q9HCQ5 603 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 TDP1Q9NUW8 608 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC23A1Q9UHI7 598 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 SPEF1Q9Y4P9 236 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 MAST3O60307 1309 aa3.38□□□□□ -1.87
HMGB1P24-202ENST00000615653 WNT10BO00744 389 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 GABRDO14764 452 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 TPD52L2O43399 206 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 XPOTO43592 962 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ERN1O75460 977 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ELANEP08246 267 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MYBL2P10244 700 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 C5AR1P21730 350 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MPLP40238 635 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 CDKN1CP49918 316 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ADKP55263 362 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 CXADRP78310 365 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MPP3Q13368 585 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MTMR1Q13613 665 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ACAP2Q15057 778 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 PABPC1LQ4VXU2 614 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 B3GNTL1Q67FW5 361 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZNF517Q6ZMY9 492 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 RHOT1Q8IXI2 618 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 COLGALT2Q8IYK4 626 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MORC4Q8TE76 937 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 STON2Q8WXE9 905 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 ASB10Q8WXI3 467 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 RNF31Q96EP0 1072 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 FAXDC2Q96IV6 333 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC2A13Q96QE2 648 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 BRINP2Q9C0B6 783 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 PRDM16Q9HAZ2 1276 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 TBCCD1Q9NVR7 557 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 FBXO34Q9NWN3 711 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 CALCOCO1Q9P1Z2 691 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 TUBD1Q9UJT1 453 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 INTUQ9ULD6 942 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 RUVBL1Q9Y265 456 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 MAP3K2Q9Y2U5 619 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 NEU2Q9Y3R4 380 aa3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 CFAP20Q9Y6A4 193 aaKnown RBP3.37□□□□□ -1.87
HMGB1P24-202ENST00000615653 hCG_2014768A0A024R1R8 64 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 CDHR4A6H8M9 788 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 SERINC4A6NH21 518 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 LRRC3CA6NJW4 275 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 FZD9O00144 591 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 KIAA0391O15091 583 aaKnown RBP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 PROP1O75360 226 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 ITGAMP11215 1152 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLC6A2P23975 617 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 IGBP1P78318 339 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 AMPD3Q01432 767 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 ITKQ08881 620 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 SCAPQ12770 1279 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 TARDBPQ13148 414 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 ABCB5Q2M3G0 1257 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 UBE3BQ7Z3V4 1068 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 PNMA8AQ86V59 439 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZGPATQ8N5A5 531 aaKnown RBP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 AOPEPQ8N6M6 819 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 PPM1NQ8N819 430 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 PRPF38AQ8NAV1 312 aaKnown RBP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 DPF2Q92785 391 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 TMX3Q96JJ7 454 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 TEKT5Q96M29 485 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZSWIM1Q9BR11 485 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 PACSIN1Q9BY11 444 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 MAN1C1Q9NR34 630 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 DMTF1Q9Y222 760 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 MTO1Q9Y2Z2 717 aaKnown RBP3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 IPPQ9Y573 584 aa3.36□□□□□ -1.87
HMGB1P24-202ENST00000615653 TCRBV7S2A1N4TA0A589 114 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 PRR23D1E9PI22 279 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 HTRA2O43464 458 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 DTNBO60941 627 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 ARIH2O95376 493 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 ANXA1P04083 346 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 PRR23D2P0DMB1 279 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 VAV2P52735 878 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 ANAPC15P60006 121 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 HSD11B2P80365 405 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 KIF23Q02241 960 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 SLFN5Q08AF3 891 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 CYP2A13Q16696 494 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 HSP90AB2PQ58FF8 381 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 EFCAB2Q5VUJ9 269 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 GADL1Q6ZQY3 521 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 ZNF365Q70YC5 407 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 GPR149Q86SP6 731 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 TTC7BQ86TV6 843 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 DCBLD1Q8N8Z6 715 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 PDPRQ8NCN5 879 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 TBC1D15Q8TC07 691 aa3.35□□□□□ -1.87
HMGB1P24-202ENST00000615653 IFI44Q8TCB0 444 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms