RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
CDH5-208ENST00000614547 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ATP6V1B1P15313 513 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ANXA13P27216 316 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 POLD1P28340 1107 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 PTPN4P29074 926 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 TFDP1Q14186 410 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDH5-208ENST00000614547 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDH5-208ENST00000614547 TCP10LQ8TDR4 215 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ZNF75CPQ92670 426 aaPredicted RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 CLPTM1LQ96KA5 538 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 WHRNQ9P202 907 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 PACSIN3Q9UKS6 424 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 DENND3A2RUS2 1198 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 IPO5O00410 1097 aaKnown RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 COPEO14579 308 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 KRT19P08727 400 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 TPBGLP0DKB5 382 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ATP6V1C1P21283 382 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 USP4Q13107 963 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 KCNT1Q5JUK3 1230 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 RHOT1Q8IXI2 618 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDH5-208ENST00000614547 RFWD2Q8NHY2 731 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 HSPH1Q92598 858 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 KMT5AQ9NQR1 393 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 GTF3C4Q9UKN8 822 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 SPECC1L-ADORA2AF8WAN1 911 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 PIK3R2O00459 728 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 PEX11AO75192 247 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 NDUFB10O96000 172 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ARP10275 920 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 LIG4P49917 911 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 AP3B2Q13367 1082 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 FAXCQ5TGI0 409 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 KRT39Q6A163 491 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ZFPM1Q8IX07 1006 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ST13P4Q8IZP2 240 aaPredicted RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 MTBPQ96DY7 904 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 TMEM206Q9H813 350 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 KIAA1586Q9HCI6 787 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 ARL8BQ9NVJ2 186 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 WASF2Q9Y6W5 498 aa12.43□□□□□ -0.42
CDH5-208ENST00000614547 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
CDH5-208ENST00000614547 ZWINTO95229 277 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 CHRNB2P17787 502 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 SAT1P21673 171 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 SP100P23497 879 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 ACOT2P49753 483 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 SEZ6Q53EL9 994 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 DNAJC24Q6P3W2 148 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 EGFL6Q8IUX8 553 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 DNPEPQ9ULA0 475 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 EXOC7Q9UPT5 735 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 PCDHA3Q9Y5H8 950 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 PCDHA2Q9Y5H9 948 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 GCLCP48506 637 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 PPP4CP60510 307 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 CAV1Q03135 178 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 CCDC33Q8N5R6 958 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 POU5F2Q8N7G0 328 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 FBXL13Q8NEE6 735 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 RBM17Q96I25 401 aaKnown RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 SPEF2Q9C093 1822 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 JAM2P57087 298 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 OSTNP61366 133 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 DMP1Q13316 513 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 CDO1Q16878 200 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
CDH5-208ENST00000614547 PSMC3IPQ9P2W1 217 aaPredicted RBP12.42□□□□□ -0.42
CDH5-208ENST00000614547 A0A1B0GVG6 124 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 LRRIQ4A6NIV6 560 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 DNAJC6O75061 913 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 GYS1P13807 737 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
CDH5-208ENST00000614547 MGAT5Q09328 741 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 TRAF1Q13077 416 aa12.41□□□□□ -0.42
CDH5-208ENST00000614547 TTC7BQ86TV6 843 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms