RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 LMO3Q8TAP4 145 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 WNT8BQ93098 351 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 LIN7AO14910 233 aaPredicted RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 HBP1O60381 514 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 ANP32DO95626 131 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 GLI1P08151 1106 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 PAEPP09466 180 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 SMIM10L2AP0DMW4 78 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 SMIM10L2BP0DMW5 78 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 RPS6KA3P51812 740 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 MYL7Q01449 175 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 GNASQ5JWF2 1037 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 IQSEC1Q6DN90 963 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 LRIG3Q6UXM1 1119 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 PALB2Q86YC2 1186 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 KIAA0319LQ8IZA0 1049 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 DNAJB3Q8WWF6 145 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 NLRP7Q8WX94 980 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 APBA2Q99767 749 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 ADAMTS1Q9UHI8 967 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 SALL4Q9UJQ4 1053 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 AGO2Q9UKV8 859 aaKnown RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 SLC16A3O15427 465 aaKnown RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 MAGEA1P43355 309 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 HIBCHQ6NVY1 386 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 PDXDC1Q6P996 788 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 KRT12Q99456 494 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 OSMRQ99650 979 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.61□□□□□ -0.71
GGA3-221ENST00000614198 INTS2Q9H0H0 1204 aaKnown RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 ST6GALNAC4Q9H4F1 302 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 RBM12Q9NTZ6 932 aaKnown RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 CAPN6Q9Y6Q1 641 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 SMIM23A6NLE4 172 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 EIF4E1BA6NMX2 242 aaKnown RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 HGSO14964 777 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 PRKCBP05771 671 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 UBE2TQ9NPD8 197 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 PLAGL2Q9UPG8 496 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 UMODL1Q5DID0 1318 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 A6NJR5 290 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 FOXN3O00409 490 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 HOXC6P09630 235 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 TNNI1P19237 187 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 RFC5P40937 340 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 RAB27AP51159 221 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 CDK17Q00537 523 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 PTK2Q05397 1052 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 MBTD1Q05BQ5 628 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 CYP24A1Q07973 514 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 NOGQ13253 232 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 PPP1R7Q15435 360 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 SV2AQ7L0J3 742 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 OR2W6PQ8NHA6 318 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 UBLCP1Q8WVY7 318 aaPredicted RBP10.61□□□□□ -0.71
GGA3-221ENST00000614198 CCDC113Q9H0I3 377 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 PLCB1Q9NQ66 1216 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 DNAJC12Q9UKB3 198 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 PLAAQ9Y263 795 aa10.61□□□□□ -0.71
GGA3-221ENST00000614198 A0A087X0T9 212 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 GPR25O00155 361 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 CLDN3O15551 220 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 CST3P01034 146 aaPredicted RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 GSTA1P08263 222 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 CLTAP09496 248 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 FAM228BP0C875 321 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 KRT13P13646 458 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 CDC25CP30307 473 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 SP3Q02447 781 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 FSCN1Q16658 493 aaKnown RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 SLC5A9Q2M3M2 681 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 BRDTQ58F21 947 aaPredicted RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 IER5Q5VY09 327 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 ZNF571Q7Z3V5 609 aaPredicted RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 SLC9A9Q8IVB4 645 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 GPD1LQ8N335 351 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 GOLPH3Q9H4A6 298 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 FESP07332 822 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 MYZAPP0CAP1 466 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 TMOD1P28289 359 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 APLP1P51693 650 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 FCGRTP55899 365 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 IRF2BP2Q7Z5L9 587 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 PPM1KQ8N3J5 372 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 RETREG2Q8NC44 543 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 ACO2Q99798 780 aaKnown RBP10.6□□□□□ -0.71
GGA3-221ENST00000614198 TIPINQ9BVW5 301 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 MAF1Q9H063 256 aa10.6□□□□□ -0.71
GGA3-221ENST00000614198 METTL14Q9HCE5 456 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms