RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 TRIM65Q6PJ69 517 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 STX19Q8N4C7 294 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 PCYOX1LQ8NBM8 494 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 AGAP11Q8TF27 550 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 ABHD8Q96I13 439 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 MAP3K14Q99558 947 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 NDNQ99608 321 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 DDX50Q9BQ39 737 aaKnown RBP7.21□□□□□ -1.26
CLCN3-211ENST00000613795 BTBD10Q9BSF8 475 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 RPAP3Q9H6T3 665 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-211ENST00000613795 TRIM10Q9UDY6 481 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
CLCN3-211ENST00000613795 PDS5AQ29RF7 1337 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DNALI1O14645 258 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 AREL1O15033 823 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 PEX5P50542 639 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 RGS21Q2M5E4 152 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SPDYE2Q495Y8 402 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 ZBTB41Q5SVQ8 909 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TMEM35BQ8NCS4 154 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 RBM15Q96T37 977 aaKnown RBP eCLIP7.2□□□□□ -1.266e-7■■■□□ 17.5
CLCN3-211ENST00000613795 C1orf50Q9BV19 199 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CALN1Q9BXU9 219 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 VPS11Q9H270 941 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TIMMDC1Q9NPL8 285 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SEC31BQ9NQW1 1179 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 WDR37Q9Y2I8 494 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FAM25AB3EWG3 89 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FAM25CB3EWG5 89 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FAM25GB3EWG6 89 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 PRR23D1E9PI22 279 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 ALBP02768 609 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 PRR23D2P0DMB1 279 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CCNHP51946 323 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 LBRQ14739 615 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 NAALADL2Q58DX5 795 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 ARMCX4Q5H9R4 360 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FASTKD5Q7L8L6 764 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 LRRC6Q86X45 466 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TMPRSS6Q8IU80 811 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DCLK2Q8N568 766 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 ENGASEQ8NFI3 743 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SEPT1Q8WYJ6 367 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DNAJC7Q99615 494 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 METTL5Q9NRN9 209 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 HEY2Q9UBP5 337 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 IP6K2Q9UHH9 426 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CDY2AQ9Y6F7 541 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CDY1Q9Y6F8 540 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FAM170AA1A519 330 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 GOLGA8TH3BQL2 631 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 MYBL2P10244 700 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CDC25AP30304 524 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SOX6P35712 828 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 PLOD1Q02809 727 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 MTMR1Q13613 665 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TTLL4Q14679 1199 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 MDH1BQ5I0G3 518 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 OR6B2Q6IFH4 312 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 POTEEQ6S8J3 1075 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 MIGA2Q7L4E1 593 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SAMD3Q8N6K7 520 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CNPY3Q9BT09 278 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 POLD4Q9HCU8 107 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DIP2AQ14689 1571 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CCDC78A2IDD5 438 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 LSM1O15116 133 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TBX3O15119 743 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 STX7O15400 261 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 USP1O94782 785 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CCDC166P0CW27 439 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SRGAP2CP0DJJ0 459 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SOX5P35711 763 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FNTAP49354 379 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 GPC3P51654 580 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 RAB15P59190 212 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CENPCQ03188 943 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 FCHO2Q0JRZ9 810 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DPYDQ12882 1025 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 SGMS1Q86VZ5 419 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 CLEC4FQ8N1N0 589 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 ARL10Q8N8L6 244 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 XXYLT1Q8NBI6 393 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 APOL6Q9BWW8 343 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TRIM45Q9H8W5 580 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 HMG20AQ9NP66 347 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 DDX18Q9NVP1 670 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 HACD3Q9P035 362 aa7.2□□□□□ -1.26
CLCN3-211ENST00000613795 RSL24D1Q9UHA3 163 aaKnown RBP7.2□□□□□ -1.26
CLCN3-211ENST00000613795 TRIM24O15164 1050 aa7.19□□□□□ -1.26
CLCN3-211ENST00000613795 CLIC2O15247 247 aa7.19□□□□□ -1.26
CLCN3-211ENST00000613795 LZTS3O60299 673 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-211ENST00000613795 RHOBTB1O94844 696 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms