RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MLXIPQ9HAP2 919 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 MYO3BQ8WXR4 1341 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 S100A6P06703 90 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 JAMLQ86YT9 394 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 ZFAND2BQ8WV99 257 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RPRD1BQ9NQG5 326 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 PHF11Q9UIL8 331 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 C6orf229H3BNL8 230 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 MMP14P50281 582 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 MYBPC2Q14324 1141 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 PEX5LQ8IYB4 626 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 SNX19Q92543 992 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 HSPH1Q92598 858 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 CHID1Q9BWS9 393 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 ERAP1Q9NZ08 941 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 USE1Q9NZ43 259 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 ABCC10Q5T3U5 1492 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 KIF22Q14807 665 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 SIRT1Q96EB6 747 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 FANCAO15360 1455 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 KIAA0391O15091 583 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 KITP10721 976 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 PGBD1Q96JS3 809 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 PNKPQ96T60 521 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 DCLK3Q9C098 648 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RTN2O75298 545 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 CPA3P15088 417 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RPL26P61254 145 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 PPM1NQ8N819 430 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 TMIEQ8NEW7 156 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 DYRK4Q9NR20 520 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 LRRN2O75325 713 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 NR3C1P04150 777 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 AP3M2P53677 418 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RINLQ6ZS11 566 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 SMCR8Q8TEV9 937 aaPredicted RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 CDHR1Q96JP9 859 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 DBNDD2Q9BQY9 259 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 ASAP1Q9ULH1 1129 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 STARD13Q9Y3M8 1113 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 KRT19P08727 400 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 OSBPP22059 807 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SDE2Q6IQ49 451 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SCYL2Q6P3W7 929 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 TTC16Q8NEE8 873 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 CHURC1Q8WUH1 139 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ADD3Q9UEY8 706 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 BCORL1Q5H9F3 1711 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ADCY10Q96PN6 1610 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 KLHL33A6NCF5 533 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 SRGNP10124 158 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 CASP5P51878 434 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 DPYSQ14117 519 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 LRRC34Q8IZ02 419 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 NDUFAF2Q8N183 169 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SNX31Q8N9S9 440 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 DNAJC7Q99615 494 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 STK33Q9BYT3 514 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SPRTNQ9H040 489 aaPredicted RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 SERHL2Q9H4I8 314 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SERHLQ9NQF3 203 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 CNTRLQ7Z7A1 2325 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 SNRPFP62306 86 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 MAPK7Q13164 816 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PTK7Q13308 1070 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 GALNT4Q8N4A0 578 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 TUBGCP5Q96RT8 1024 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 PAIP1Q9H074 479 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 PHTF1Q9UMS5 762 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 DLATP10515 647 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
TTC28-208ENST00000612946 GRIK1P39086 918 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 RFC5P40937 340 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 CLCN2P51788 898 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ACLYP53396 1101 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 BLMHQ13867 455 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 USHBP1Q8N6Y0 703 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 TSPAN14Q8NG11 270 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 OSBPL11Q9BXB4 747 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 KCND2Q9NZV8 630 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 UBOX5O94941 541 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 CBX3Q13185 183 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
TTC28-208ENST00000612946 ZBTB49Q6ZSB9 765 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms