RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 C1orf127Q8N9H9 656 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 OR5B17Q8NGF7 314 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 PLEKHO2Q8TD55 490 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 PIK3R5Q8WYR1 880 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 CCDC127Q96BQ5 260 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 SUSD3Q96L08 255 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 POP1Q99575 1024 aaKnown RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 EMILIN2Q9BXX0 1053 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 GTPBP4Q9BZE4 634 aaKnown RBP12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 MTMR12Q9C0I1 747 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 COG5Q9UP83 839 aa12.24□□□□□ -0.45
CCL3L3-201ENST00000612839 FSD2A1L4K1 749 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 M0QZQ0 153 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 SYN3O14994 580 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 SPTLC1O15269 473 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 AKAP3O75969 853 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 ITGB3P05106 788 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 DLATP10515 647 aaKnown RBP12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 KCNA5P22460 613 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 LILRA4P59901 499 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 TMEM184AQ6ZMB5 413 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 EP400NLQ6ZTU2 488 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 TRIML1Q8N9V2 468 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 CACTINQ8WUQ7 758 aaKnown RBP12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 EEF2KMTQ96G04 330 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 FNBP1Q96RU3 617 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 CLEC1BQ9P126 229 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 TSC2P49815 1807 aa12.23□□□□□ -0.45
CCL3L3-201ENST00000612839 VCANP13611 3396 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 H3BQ06 376 aaPredicted RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 ADH1AP07327 375 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 TMEM191BP0C7N4 346 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 TNNI1P19237 187 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 RPL13P26373 211 aaKnown RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 KLRC2P26717 231 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 POLR2BP30876 1174 aaKnown RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 NDUFV1P49821 464 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 CLCN4P51793 760 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 DLG4P78352 724 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 CLDN10P78369 228 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 ADAM9Q13443 819 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 PSMD5Q16401 504 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 DUOXA2Q1HG44 320 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 LLGL2Q6P1M3 1020 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 SLC22A17Q8WUG5 538 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 ZNF516Q92618 1163 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 BORCS6Q96GS4 357 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 ANKRD36BP1Q96IX9 119 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 CGRRF1Q99675 332 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 CLSTN3Q9BQT9 956 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 ITGA11Q9UKX5 1188 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 BARX2Q9UMQ3 279 aaPredicted RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 MTCL1Q9Y4B5 1905 aaKnown RBP12.22□□□□□ -0.45
CCL3L3-201ENST00000612839 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 PSMA7O14818 248 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 MAPK13O15264 365 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 ADAM12O43184 909 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 EPCAMP16422 314 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 CCNE1P24864 410 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 PPP1R2P41236 205 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 TAF6P49848 677 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 LRRC63Q05C16 580 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 STIM1Q13586 685 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 PDXDC1Q6P996 788 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 RSPO2Q6UXX9 243 aaPredicted RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 ANKS3Q6ZW76 656 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 TRAPPC11Q7Z392 1133 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 GLYCTKQ8IVS8 523 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 TIMM13Q9Y5L4 95 aaPredicted RBP12.21□□□□□ -0.45
CCL3L3-201ENST00000612839 KPNA7A9QM74 516 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 TBC1D4O60343 1298 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 TNNC2P02585 160 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 KRT19P08727 400 aa12.21□□□□□ -0.46
CCL3L3-201ENST00000612839 PAX3P23760 479 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms