RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MYBL1P10243 752 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 PAX7P23759 505 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 SESN3P58005 492 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 C4orf19Q8IY42 314 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 CCDC89Q8N998 374 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 LRRN4Q8WUT4 740 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 SUFUQ9UMX1 484 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 MAP3K6O95382 1288 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 NR3C2P08235 984 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 BRD2P25440 801 aaKnown RBP14.89□□□□□ -0.03
COL6A1-207ENST00000612273 RPA3P35244 121 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-207ENST00000612273 PTGER2P43116 358 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-207ENST00000612273 PDIA2Q13087 525 aaKnown RBP14.89□□□□□ -0.03
COL6A1-207ENST00000612273 MAMLD1Q13495 774 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 ALCAMQ13740 583 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 MYBPC2Q14324 1141 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 SPDYCQ5MJ68 293 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 LIN9Q5TKA1 542 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 MFSD5Q6N075 450 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 RHOT1Q8IXI2 618 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 IFT74Q96LB3 600 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-207ENST00000612273 RNF146Q9NTX7 359 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 ATRNL1Q5VV63 1379 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 PROSCO94903 275 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 ATP5DP30049 168 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 SSTR1P30872 391 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 PRKCEQ02156 737 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 NFX1Q12986 1120 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 PTK6Q13882 451 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MCF2L2Q86YR7 1114 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 ZNF526Q8TF50 670 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MRIQ9BWK5 157 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 TRABDQ9H4I3 376 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 XPNPEP1Q9NQW7 623 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 RBAKQ9NYW8 714 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 AGO2Q9UKV8 859 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 CENPFP49454 3210 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 CNTNAP1P78357 1384 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 TAC1P20366 129 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MSH2P43246 934 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 HIRAP54198 1017 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 CROCCP2Q86T23 111 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MORC4Q8TE76 937 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 P3H4Q92791 437 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 CNKSR1Q969H4 720 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MYLK2Q9H1R3 596 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 PCSK1NQ9UHG2 260 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 NUB1Q9Y5A7 615 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 ATP8B3O60423 1300 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 SPATA31A6Q5VVP1 1343 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MTA2O94776 668 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MAPTP10636 758 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 SMAD1Q15797 465 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 SEPT7Q16181 437 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 TAS1R3Q7RTX0 852 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 USP37Q86T82 979 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MICAL1Q8TDZ2 1067 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 MOV10L1Q9BXT6 1211 aaKnown RBP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 PXMP2Q9NR77 195 aa14.88□□□□□ -0.03
COL6A1-207ENST00000612273 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL6A1-207ENST00000612273 ZNF541Q9H0D2 1346 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 CD19P15391 556 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 GTF2H1P32780 548 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 HSPA1LP34931 641 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 IL9RQ01113 521 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 STRN3Q13033 797 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 SNRNP48Q6IEG0 339 aaKnown RBP14.87□□□□□ -0.03
COL6A1-207ENST00000612273 RFX8Q6ZV50 586 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 TJP2Q9UDY2 1190 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 FAM47DPA6NHR8 397 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 PEX19P40855 299 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 WLSQ5T9L3 541 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 HHATQ5VTY9 493 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 KCTD17Q8N5Z5 321 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 RSRC1Q96IZ7 334 aaKnown RBP14.87□□□□□ -0.03
COL6A1-207ENST00000612273 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 NPHS2Q9NP85 383 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
COL6A1-207ENST00000612273 PHTF1Q9UMS5 762 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 TAF1LQ8IZX4 1826 aa14.87□□□□□ -0.03
COL6A1-207ENST00000612273 K7ERI5 159 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 WNT10BO00744 389 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 NEBLO76041 1014 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-207ENST00000612273 MUTP22033 750 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 MARK3P27448 753 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 SLC1A5Q15758 541 aa14.86□□□□□ -0.03
COL6A1-207ENST00000612273 EMC1Q8N766 993 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms