RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 MTMR12Q9C0I1 747 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 PLEKHA4Q9H4M7 779 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 FBXW11Q9UKB1 542 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 EXOC3O60645 756 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 KINO60870 393 aaKnown RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 ITGB3P05106 788 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 TMEM191BP0C7N4 346 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 POLR2BP30876 1174 aaKnown RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 MTHFRP42898 656 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 ARPP19P56211 112 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 MRPL58Q14197 206 aaKnown RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 SURF1Q15526 300 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 ATAT1Q5SQI0 421 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 ZNF280DQ6N043 979 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 C1orf127Q8N9H9 656 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 HDAC7Q8WUI4 952 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 SENP8Q96LD8 212 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 POP1Q99575 1024 aaKnown RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 PHF7Q9BWX1 381 aaPredicted RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 HOOK1Q9UJC3 728 aaKnown RBP28.11■■■□□ 2.09
VEGFA-226ENST00000611736 FBXL5Q9UKA1 691 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 C2orf16Q68DN1 1984 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 PTPRJQ12913 1337 aa28.11■■■□□ 2.09
VEGFA-226ENST00000611736 CCDC195A0A1B0GUA6 201 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 KIF20AO95235 890 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 TAF6P49848 677 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 YWHAHQ04917 246 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-226ENST00000611736 CYP24A1Q07973 514 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 GPR149Q86SP6 731 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 USP37Q86T82 979 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 SMYD4Q8IYR2 804 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-226ENST00000611736 OR5B17Q8NGF7 314 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 ANKRD36BP1Q96IX9 119 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 NECTIN4Q96NY8 510 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 POMKQ9H5K3 350 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 INTS13Q9NVM9 706 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 AGAP1Q9UPQ3 857 aa28.1■■■□□ 2.09
VEGFA-226ENST00000611736 PDXKO00764 312 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 TBC1D4O60343 1298 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 SMC2O95347 1197 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 DLATP10515 647 aaKnown RBP28.09■■■□□ 2.09
VEGFA-226ENST00000611736 ODC1P11926 461 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 SP100P23497 879 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-226ENST00000611736 ROR1Q01973 937 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 LIN9Q5TKA1 542 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 CSGALNACT2Q8N6G5 542 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 CMASQ8NFW8 434 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-226ENST00000611736 CCDC127Q96BQ5 260 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 RPGRIP1Q96KN7 1286 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 ZNF560Q96MR9 790 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 RMND1Q9NWS8 449 aa28.09■■■□□ 2.09
VEGFA-226ENST00000611736 C19orf67A6NJJ6 358 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 TNNC2P02585 160 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 NR3C1P04150 777 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 KRT19P08727 400 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 PAX3P23760 479 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 PSMD6Q15008 389 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 SCARA3Q6AZY7 606 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 SLC8B1Q6J4K2 584 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 GUF1Q8N442 669 aaKnown RBP28.08■■■□□ 2.09
VEGFA-226ENST00000611736 SMARCE1Q969G3 411 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 FNBP1Q96RU3 617 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 DMAC2Q9NW81 257 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 ITGA11Q9UKX5 1188 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 PCDHA5Q9Y5H7 936 aa28.08■■■□□ 2.09
VEGFA-226ENST00000611736 CYB561D2O14569 222 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 CALUO43852 315 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-226ENST00000611736 C8AP07357 584 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 TYMPP19971 482 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 DUOXA2Q1HG44 320 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 SV2CQ496J9 727 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 OVOS1Q6IE37 1185 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 C15orf39Q6ZRI6 1047 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 WDR49Q8IV35 697 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 SLC9A9Q8IVB4 645 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 GSDMAQ96QA5 445 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 TSHZ2Q9NRE2 1034 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 ZDHHC7Q9NXF8 308 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 SIX4Q9UIU6 781 aa28.07■■■□□ 2.08
VEGFA-226ENST00000611736 WDR27A2RRH5 827 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 ZMYND10O75800 440 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 OAZ2O95190 189 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 TNNI1P19237 187 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 PNPLA4P41247 253 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 UBE2HP62256 183 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 RBP5P82980 135 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 BFSP1Q12934 665 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 CXorf38Q8TB03 319 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 SLC7A14Q8TBB6 771 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 SMG7Q92540 1137 aaKnown RBP28.06■■■□□ 2.08
VEGFA-226ENST00000611736 ZNF707Q96C28 371 aaPredicted RBP28.06■■■□□ 2.08
VEGFA-226ENST00000611736 MFSD14AQ96MC6 490 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 CGRRF1Q99675 332 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 TSC2P49815 1807 aa28.06■■■□□ 2.08
VEGFA-226ENST00000611736 ARHGEF37A1IGU5 675 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 KPNA7A9QM74 516 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 PRPF40AO75400 957 aaKnown RBP28.05■■■□□ 2.08
VEGFA-226ENST00000611736 PPM1LQ5SGD2 360 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 ZNF461Q8TAF7 563 aa28.05■■■□□ 2.08
VEGFA-226ENST00000611736 BORCS6Q96GS4 357 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms