RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 GJB5O95377 273 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 APBA1Q02410 837 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 RNASELQ05823 741 aaKnown RBP17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 CCDC173Q0VFZ6 552 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 ARID5BQ14865 1188 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 ZNF697Q5TEC3 545 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 IQCEQ6IPM2 695 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 ARHGEF19Q8IW93 802 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 LRRC43Q8N309 656 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 BAP1Q92560 729 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 ZNF560Q96MR9 790 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 FAM193BQ96PV7 902 aaPredicted RBP17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 UBE2TQ9NPD8 197 aaPredicted RBP17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 GDAP2Q9NXN4 497 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 DNAJC12Q9UKB3 198 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 SLC4A7Q9Y6M7 1214 aa17.15■□□□□ 0.34
CLTCL1-207ENST00000611723 RNF225M0QZC1 329 aaPredicted RBP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 P4HA1P13674 534 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 TBXAS1P24557 533 aaPredicted RBP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 AARSP49588 968 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 TAF6P49848 677 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 CLCNKBP51801 687 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 MFAP3P55082 362 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 LILRA4P59901 499 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 POLR2FP61218 127 aaKnown RBP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 ZBED6P86452 979 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 LRMPQ12912 555 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 SV2CQ496J9 727 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 ZNF667Q5HYK9 610 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 SPOPLQ6IQ16 392 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 CD300LGQ6UXG3 332 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 LIMS2Q7Z4I7 341 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 KREMEN1Q96MU8 473 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 NIF3L1Q9GZT8 377 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 FAM124BQ9H5Z6 455 aaPredicted RBP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 LUC7L2Q9Y383 392 aaKnown RBP17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 FHOD1Q9Y613 1164 aa17.14■□□□□ 0.33
CLTCL1-207ENST00000611723 CARNS1A5YM72 827 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 CASTOR2A6NHX0 329 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 B4GALT3O60512 393 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 ALDH2P05091 517 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 TPM1P09493 284 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 CASP14P31944 242 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 JAM2P57087 298 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 CUL2Q13617 745 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 SHHQ15465 462 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 RRAGAQ7L523 313 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 HERC6Q8IVU3 1022 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 SPC24Q8NBT2 197 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 MYLIPQ8WY64 445 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 PAAF1Q9BRP4 392 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 BCO2Q9BYV7 579 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 NUCKS1Q9H1E3 243 aaKnown RBP17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 CWH43Q9H720 699 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 CYP3A43Q9HB55 503 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 INSL6Q9Y581 213 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
CLTCL1-207ENST00000611723 PTPRSQ13332 1948 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 KPNA7A9QM74 516 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 AKR1B15C9JRZ8 316 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 SPTLC1O15269 473 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 GALTP07902 379 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 ASPAP45381 313 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 GSDMDP57764 484 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 DPH6Q7L8W6 267 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 PPM1KQ8N3J5 372 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 KAT5Q92993 513 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 ELMO3Q96BJ8 720 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 RAD9AQ99638 391 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 GPR88Q9GZN0 384 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 DNAJB4Q9UDY4 337 aa17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 AJAP1Q9UKB5 411 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-207ENST00000611723 NRP1O14786 923 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 MFAP3LO75121 409 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 B3GAT3O94766 335 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 HNRNPH3P31942 346 aaKnown RBP17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 KRT9P35527 623 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 OR1G1P47890 313 aa17.11■□□□□ 0.33
CLTCL1-207ENST00000611723 TNNC1P63316 161 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms