RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 M0QZQ0 153 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PIRO00625 290 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 HCRTO43612 131 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 NARSO43776 548 aaKnown RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 MTHFRP42898 656 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ARPP19P56211 112 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 PTPN21Q16825 1174 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 TMEM31Q5JXX7 168 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ATAT1Q5SQI0 421 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 SLC8B1Q6J4K2 584 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 CES5AQ6NT32 575 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 GRASPQ7Z6J2 395 aaPredicted RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 GPR65Q8IYL9 337 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PLEKHO2Q8TD55 490 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 EDAQ92838 391 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ELMO3Q96BJ8 720 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 CCDC34Q96HJ3 373 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 FAM213AQ9BRX8 229 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PLEKHA5Q9HAU0 1116 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNCA-212ENST00000611107 DNMT3BQ9UBC3 853 aaKnown RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 PCDHA5Q9Y5H7 936 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 BACE2Q9Y5Z0 518 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
SNCA-212ENST00000611107 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 NCANO14594 1321 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 CLUHO75153 1309 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 M0R296 226 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 CLIC2O15247 247 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SOAT2O75908 522 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 ABLIM3O94929 683 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 C8AP07357 584 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 BMP6P22004 513 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 MCM4P33991 863 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 CCR2P41597 374 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 VCPP55072 806 aaKnown RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 LILRA4P59901 499 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 PPP2R3AQ06190 1150 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 PSMD2Q13200 908 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 CAMK4Q16566 473 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 C15orf39Q6ZRI6 1047 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 STXBP4Q6ZWJ1 553 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 CBWD2Q8IUF1 395 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 OR5B17Q8NGF7 314 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 OR10T2Q8NGX3 314 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 TCEAL4Q96EI5 215 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SENP8Q96LD8 212 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 KCTD10Q9H3F6 313 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SLC38A7Q9NVC3 462 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
SNCA-212ENST00000611107 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 PATJQ8NI35 1801 aa9.38□□□□□ -0.91
SNCA-212ENST00000611107 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 MOSPD3O75425 235 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 SMC2O95347 1197 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 CYP3A5P20815 502 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 GARTP22102 1010 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
SNCA-212ENST00000611107 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 KNOP1Q1ED39 458 aaKnown RBP9.37□□□□□ -0.91
SNCA-212ENST00000611107 CTXN3Q4LDR2 81 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 ZNF658Q5TYW1 1059 aaPredicted RBP9.37□□□□□ -0.91
SNCA-212ENST00000611107 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 OSTM1Q86WC4 334 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 BRSK2Q8IWQ3 736 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 ZDHHC14Q8IZN3 488 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 HS6ST3Q8IZP7 471 aa9.37□□□□□ -0.91
SNCA-212ENST00000611107 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms