RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 UAP1Q16222 522 aaPredicted RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 SMYD5Q6GMV2 418 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 TTC27Q6P3X3 843 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 ZNF467Q7Z7K2 595 aaPredicted RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 EMID1Q96A84 441 aaPredicted RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 ANKRD36BP1Q96IX9 119 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 MORF4L1Q9UBU8 362 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 CCL15-CCL14A0A0B4J2E2 113 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 MAGEB2O15479 319 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 RARAP10276 462 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 GCLCP48506 637 aaPredicted RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 CCL15Q16663 113 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 PLEKHA7Q6IQ23 1121 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 CCDC137Q6PK04 289 aaKnown RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 LINC01465Q8N7H1 131 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 IFT122Q9HBG6 1241 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.87■■■□□ 2.37
CSPG5-205ENST00000610462 SCINQ9Y6U3 715 aa29.87■■■□□ 2.37
CSPG5-205ENST00000610462 PODXLO00592 558 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 IL18RAPO95256 599 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 ACTN2P35609 894 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 OSTNP61366 133 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 FAM187BQ17R55 369 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 MMS22LQ6ZRQ5 1243 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 CDR2LQ86X02 465 aaPredicted RBP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 CEP120Q8N960 986 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 C12orf50Q8NA57 414 aaPredicted RBP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 C1orf131Q8NDD1 294 aaKnown RBP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 KATNBL1Q9H079 304 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 CISHQ9NSE2 258 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 FSCN2O14926 492 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 IQCF3P0C7M6 154 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 COILP38432 576 aaPredicted RBP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 MAMLD1Q13495 774 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 ZNF699Q32M78 642 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 TMC3Q7Z5M5 1100 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 AFG1LQ8WV93 481 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 RPF1Q9H9Y2 349 aaKnown RBP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 ZDHHC18Q9NUE0 388 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.86■■■□□ 2.37
CSPG5-205ENST00000610462 IVNS1ABPQ9Y6Y0 642 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 COL1A2P08123 1366 aa29.86■■■□□ 2.37
CSPG5-205ENST00000610462 CD58P19256 250 aa29.85■■■□□ 2.37
CSPG5-205ENST00000610462 ANKRD23Q86SG2 305 aa29.85■■■□□ 2.37
CSPG5-205ENST00000610462 IFNLR1Q8IU57 520 aaPredicted RBP29.85■■■□□ 2.37
CSPG5-205ENST00000610462 BRI3BPQ8WY22 251 aa29.85■■■□□ 2.37
CSPG5-205ENST00000610462 FMO2Q99518 471 aa29.85■■■□□ 2.37
CSPG5-205ENST00000610462 XYLT2Q9H1B5 865 aa29.85■■■□□ 2.37
CSPG5-205ENST00000610462 ADCYAP1R1P41586 468 aa29.84■■■□□ 2.37
CSPG5-205ENST00000610462 FNTAP49354 379 aa29.84■■■□□ 2.37
CSPG5-205ENST00000610462 LEKR1Q6ZMV7 388 aa29.84■■■□□ 2.37
CSPG5-205ENST00000610462 H0YGN5 161 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 LSM8O95777 96 aaKnown RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 CXCL8P10145 99 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 MMP8P22894 467 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 MKRN3Q13064 507 aaKnown RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 MAP1SQ66K74 1059 aaPredicted RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 DDX27Q96GQ7 796 aaKnown RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 LRRC19Q9H756 370 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 PARVAQ9NVD7 372 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 CALCOCO1Q9P1Z2 691 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 SNX24Q9Y343 169 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 NFS1Q9Y697 457 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 A0A087WZ62 844 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 GPR25O00155 361 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 RPS6KA5O75582 802 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 SNAI1O95863 264 aaPredicted RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 GBP1P32455 592 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 ASPAP45381 313 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 DHX9Q08211 1270 aaKnown RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 TMEM192Q8IY95 271 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 UBLCP1Q8WVY7 318 aaPredicted RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 MAIP1Q8WWC4 291 aa29.83■■■□□ 2.37
CSPG5-205ENST00000610462 FDXACB1Q9BRP7 624 aaPredicted RBP29.83■■■□□ 2.37
CSPG5-205ENST00000610462 SHOX2O60902 331 aaPredicted RBP29.82■■■□□ 2.36
CSPG5-205ENST00000610462 ERLIN2O94905 339 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 MCF2P10911 925 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 TNFAIP2Q03169 654 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 AMHR2Q16671 573 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 CEP85LQ5SZL2 805 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 CCDC105Q8IYK2 499 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 C16orf70Q9BSU1 422 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 TXLNGYQ9BZA5 131 aa29.82■■■□□ 2.36
CSPG5-205ENST00000610462 PSTPIP1O43586 416 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 PPFIA2O75334 1257 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 WEE2P0C1S8 567 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 ZNF286BP0CG31 522 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 BRD2P25440 801 aaKnown RBP29.81■■■□□ 2.36
CSPG5-205ENST00000610462 YWHAEP62258 255 aaKnown RBP29.81■■■□□ 2.36
CSPG5-205ENST00000610462 SPDYCQ5MJ68 293 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 FEZF2Q8TBJ5 459 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 AKT3Q9Y243 479 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 TLR3O15455 904 aaKnown RBP29.81■■■□□ 2.36
CSPG5-205ENST00000610462 PPFIA4O75335 1185 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 TMOD1P28289 359 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 ZDHHC24Q6UX98 284 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 SCARA5Q6ZMJ2 495 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 ZNF518BQ9C0D4 1074 aa29.81■■■□□ 2.36
CSPG5-205ENST00000610462 TMBIM4Q9HC24 238 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms