RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 ERFP50548 548 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 KRT76Q01546 638 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 EFTUD2Q15029 972 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CENPPQ6IPU0 288 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TMEM270Q6UE05 265 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TMC5Q6UXY8 1006 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ARMCX2Q7L311 632 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ANKMY2Q8IV38 441 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 RBBP8NLQ8NC74 664 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TATDN2Q93075 761 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CENPTQ96BT3 561 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 OMA1Q96E52 524 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 PARVAQ9NVD7 372 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SLC9A2Q9UBY0 812 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 MYO3AQ8NEV4 1616 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 MAP4P27816 1152 aaKnown RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 STAT3P40763 770 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 STXBP2Q15833 593 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 NDUFA5Q16718 116 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TTMPQ5BVD1 217 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TMC3Q7Z5M5 1100 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ILDR1Q86SU0 546 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 HORMAD1Q86X24 394 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 MTMR8Q96EF0 704 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 EPB41L4AQ9HCS5 686 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 WHRNQ9P202 907 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 COMMD3-BMI1R4GMX3 469 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CEP152O94986 1710 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 MYO3BQ8WXR4 1341 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SYCE1LA8MT33 242 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 RSPH10B2B2RC85 870 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CYP26A1O43174 497 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 TFRCP02786 760 aaKnown RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 RSPH10BP0C881 870 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 AKR1B1P15121 316 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CASP2P42575 452 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 FXR2P51116 673 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ROR1Q01973 937 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 PASD1Q8IV76 773 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 OR6B3Q8NGW1 331 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 DHX38Q92620 1227 aaKnown RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ZSWIM1Q9BR11 485 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 POLR3CQ9BUI4 534 aaPredicted RBP9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SUN2Q9UH99 717 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SLC12A6Q9UHW9 1150 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ARHGAP26Q9UNA1 814 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 CARD8Q9Y2G2 431 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 DENND3A2RUS2 1198 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 PJA2O43164 708 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ATP6V1G1O75348 118 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 FAM153BP0C7A2 387 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 TYK2P29597 1187 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 QARSP47897 775 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 SERPINB9P50453 376 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 MAPK6Q16659 721 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 FAM153CQ494X1 144 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 C12orf60Q5U649 245 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 SNRNP48Q6IEG0 339 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF662Q6ZS27 426 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CATSPER4Q7RTX7 472 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 EME1Q96AY2 570 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 FAM213AQ9BRX8 229 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 RNF146Q9NTX7 359 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 MRGBPQ9NV56 204 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 FAM153AQ9UHL3 310 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CPSF3Q9UKF6 684 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 TRIM16O95361 564 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CHEK2O96017 543 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 P4HBP07237 508 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 IMPDH2P12268 514 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 IL10P22301 178 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CALB2P22676 271 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 GNA15P30679 374 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 MTTPP55157 894 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 NUP107P57740 925 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 GPSM2P81274 684 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF200P98182 395 aaPredicted RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 PPP6R3Q5H9R7 873 aaPredicted RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ATP6V1E2Q96A05 226 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CCT7Q99832 543 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CACYBPQ9HB71 228 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ATAD3AQ9NVI7 634 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 HEY2Q9UBP5 337 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 WDR37Q9Y2I8 494 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 SH3BP1Q9Y3L3 701 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 TYW5A2RUC4 315 aaKnown RBP9.58□□□□□ -0.88
COL25A1-208ENST00000610288 TBKBP1A7MCY6 615 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 CHD1O14646 1710 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 FKBP6O75344 327 aa9.58□□□□□ -0.88
COL25A1-208ENST00000610288 PTENP60484 403 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms