RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 UBE3BQ7Z3V4 1068 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 PJA1Q8NG27 643 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 ZFP28Q8NHY6 868 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 ATXN2LQ8WWM7 1075 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 TFAP2CQ92754 450 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 MNTQ99583 582 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 GPR87Q9BY21 358 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 SPON1Q9HCB6 807 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 SARS2Q9NP81 518 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 GNL3LQ9NVN8 582 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 STAP2Q9UGK3 403 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 CLCA2Q9UQC9 943 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 PCDHA1Q9Y5I3 950 aa5.39□□□□□ -1.55
SMCHD1-213ENST00000609587 CFAP69A5D8W1 941 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 GOLGA6L6A8MZA4 724 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 APAF1O14727 1248 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 POMCP01189 267 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 SBK3P0C264 359 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 KRTAP10-11P60412 298 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 CNGB1Q14028 1251 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 ATXN7L2Q5T6C5 722 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 RNF220Q5VTB9 566 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 SWSAP1Q6NVH7 229 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 EFCAB12Q6NXP0 572 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 GPRIN1Q7Z2K8 1008 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 GLCCI1Q86VQ1 547 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 MB21D1Q8N884 522 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 RNF169Q8NCN4 708 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 IL17RDQ8NFM7 739 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 NLGN4YQ8NFZ3 816 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 BRIX1Q8TDN6 353 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 NT5C1BQ96P26 610 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 NDC1Q9BTX1 674 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 PACSIN1Q9BY11 444 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 ZMAT3Q9HA38 289 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 CNNM1Q9NRU3 951 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 SIDT1Q9NXL6 827 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 POGKQ9P215 609 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 CPA4Q9UI42 421 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
SMCHD1-213ENST00000609587 GOLIM4O00461 696 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 MGEA5O60502 916 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PEX11BO96011 259 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 GNAI3P08754 354 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 ALAS1P13196 640 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PHKG2P15735 406 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 HK1P19367 917 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PIK3CGP48736 1102 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 GNAI1P63096 354 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 HDAC1Q13547 482 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 SEMA5AQ13591 1074 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 TOB2Q14106 344 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 UBXN2BQ14CS0 331 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 COL23A1Q86Y22 540 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 FAM90A1Q86YD7 464 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 OR52N2Q8NGI0 321 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 LRTOMTQ8WZ04 291 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 C1orf43Q9BWL3 253 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 BHMT2Q9H2M3 363 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 SLAMF7Q9NQ25 335 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 USP25Q9UHP3 1055 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PCDHA6Q9UN73 950 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 PCDHGB6Q9Y5F9 930 aa5.37□□□□□ -1.55
SMCHD1-213ENST00000609587 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 ANO9A1A5B4 782 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 PMM2O15305 246 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 PHGDHO43175 533 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 PQBP1O60828 265 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 SLC43A1O75387 559 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 HAUS5O94927 633 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 PEX2P28328 305 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 FSTL1Q12841 308 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 PICALMQ13492 652 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 CCDC93Q567U6 631 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 KHDC1LQ5JSQ8 128 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 OR10H5Q8NGA6 315 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 TNPO1Q92973 898 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 CPEB1Q9BZB8 566 aaKnown RBP5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 GSTO2Q9H4Y5 243 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 ATP6V0A4Q9HBG4 840 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 FBXO34Q9NWN3 711 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
SMCHD1-213ENST00000609587 GRXCR1A8MXD5 290 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 AHSGP02765 367 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 KITP10721 976 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 MGAT1P26572 445 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 SLC6A4P31645 630 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 MRPS21P82921 87 aaKnown RBP5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 POLD3Q15054 466 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 VPS72Q15906 364 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 SYCP2LQ5T4T6 812 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 IL31Q6EBC2 164 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 DRICH1Q6PGQ1 229 aaPredicted RBP5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 APOA5Q6Q788 366 aa5.35□□□□□ -1.55
SMCHD1-213ENST00000609587 AOPEPQ8N6M6 819 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms