RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 RSPH1Q8WYR4 309 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 KAT5Q92993 513 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 TOP1MTQ969P6 601 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 FAM81BQ96LP2 452 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 CASD1Q96PB1 797 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 ARID3AQ99856 593 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.96□□□□□ -0.52e-13■□□□□ 8.7
CTCFL-214ENST00000608108 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.5
CTCFL-214ENST00000608108 STK33Q9BYT3 514 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 VRTNQ9H8Y1 702 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 ABHD10Q9NUJ1 306 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 NXF1Q9UBU9 619 aaKnown RBP11.96□□□□□ -0.5
CTCFL-214ENST00000608108 COL4A6Q14031 1691 aa11.96□□□□□ -0.5
CTCFL-214ENST00000608108 F8VZ95 297 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 TBXAS1P24557 533 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-214ENST00000608108 RPL9P32969 192 aaKnown RBP11.95□□□□□ -0.5
CTCFL-214ENST00000608108 PNPLA4P41247 253 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 ASPAP45381 313 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 JAM2P57087 298 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 TNNC1P63316 161 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 DSC1Q08554 894 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 CUL2Q13617 745 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 UPP1Q16831 310 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 PDXDC1Q6P996 788 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 SCARA5Q6ZMJ2 495 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 ENOSF1Q7L5Y1 443 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 TMCO2Q7Z6W1 182 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-214ENST00000608108 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 UROC1Q96N76 676 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 FAM193BQ96PV7 902 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-214ENST00000608108 PAAF1Q9BRP4 392 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 NR2E3Q9Y5X4 410 aa11.95□□□□□ -0.5
CTCFL-214ENST00000608108 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 B4GALT3O60512 393 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DGKIO75912 1065 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DDHD2O94830 711 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 P4HA1P13674 534 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 TAF6P49848 677 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 SV2CQ496J9 727 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 PAN2Q504Q3 1202 aaKnown RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 FAM117BQ6P1L5 589 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 OR8K1Q8NGG5 319 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 RABGGTAQ92696 567 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DCBLD2Q96PD2 775 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 DNAJC7Q99615 494 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 GPR88Q9GZN0 384 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 CXXC1Q9P0U4 656 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-214ENST00000608108 MYO6Q9UM54 1294 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 POLIQ9UNA4 740 aa11.94□□□□□ -0.5
CTCFL-214ENST00000608108 SPTLC1O15269 473 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 PNMA6AP0CW24 399 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 STAT1P42224 750 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 LILRA4P59901 499 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 SFMBT2Q5VUG0 894 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 E4F1Q66K89 784 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 PANX2Q96RD6 677 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 SMYD3Q9H7B4 428 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 RC3H2Q9HBD1 1191 aaKnown RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 DNAJB4Q9UDY4 337 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 SNX9Q9Y5X1 595 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 TNRC18O15417 2968 aaPredicted RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 TSC2P49815 1807 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 KIAA1671Q9BY89 1806 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 KPNA7A9QM74 516 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 B3GAT3O94766 335 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 CD58P19256 250 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 SOX5P35711 763 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 USP8P40818 1118 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 RAP1GAPP47736 663 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 OR1G1P47890 313 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 ARID5AQ03989 594 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 FMNL3Q8IVF7 1028 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 LRRC8AQ8IWT6 810 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 SHC3Q92529 594 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 BCO2Q9BYV7 579 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 NRDE2Q9H7Z3 1164 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
CTCFL-214ENST00000608108 HCSTQ9UBK5 93 aa11.93□□□□□ -0.5
CTCFL-214ENST00000608108 FOXN3O00409 490 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-214ENST00000608108 GFPT2O94808 682 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms