RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 MIF4GDA9UHW6 222 aaKnown RBP16.92■□□□□ 0.3
CTSA-214ENST00000606788 SHBGP04278 402 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 HOXC6P09630 235 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 RALAP11233 206 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 EFNA5P52803 228 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 MTM1Q13496 603 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 ERAP1Q9NZ08 941 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 GLTPD2A6NH11 291 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 F8VP50 259 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 ADCY6O43306 1168 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 ASS1P00966 412 aaKnown RBP16.92■□□□□ 0.3
CTSA-214ENST00000606788 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 SMTNL2Q2TAL5 461 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 GLRA4Q5JXX5 417 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 MPZL3Q6UWV2 235 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 LRRC31Q6UY01 552 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 MROH8Q9H579 483 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 SMYD3Q9H7B4 428 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 C10orf88Q9H8K7 445 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
CTSA-214ENST00000606788 UVRAGQ9P2Y5 699 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
CTSA-214ENST00000606788 PCDHA3Q9Y5H8 950 aa16.92■□□□□ 0.3
CTSA-214ENST00000606788 LACTBL1A8MY62 500 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 PHF2O75151 1096 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 PIGRP01833 764 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 ACTN2P35609 894 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 CLDN10P78369 228 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 MAMLD1Q13495 774 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 JADE1Q6IE81 842 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 TAPT1Q6NXT6 567 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 DCUN1D2Q6PH85 259 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 MON1BQ7L1V2 547 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 EMC1Q8N766 993 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 RPF1Q9H9Y2 349 aaKnown RBP16.91■□□□□ 0.3
CTSA-214ENST00000606788 IFT122Q9HBG6 1241 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 ASIC3Q9UHC3 531 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 HBP1O60381 514 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 C22orf31O95567 290 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 STAG3L1P0CL83 205 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 TNFRSF8P28908 595 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
CTSA-214ENST00000606788 CUL1Q13616 776 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 HP1BP3Q5SSJ5 553 aaPredicted RBP16.91■□□□□ 0.3
CTSA-214ENST00000606788 ZPBP2Q6X784 338 aa16.91■□□□□ 0.3
CTSA-214ENST00000606788 NAP1L3Q99457 506 aaPredicted RBP16.91■□□□□ 0.3
CTSA-214ENST00000606788 ACKR2O00590 384 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 ABLIM1O14639 778 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 DYNLT1P63172 113 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 PPFIA1Q13136 1202 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 TMC3Q7Z5M5 1100 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 TWNKQ96RR1 684 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 RPS6KC1Q96S38 1066 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 FOXO6A8MYZ6 492 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 H3BRB1 525 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 KIAA0391O15091 583 aaKnown RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 DYNC1LI2O43237 492 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 LGR5O75473 907 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 TNNC2P02585 160 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 TUT1Q9H6E5 874 aaKnown RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 SAE1Q9UBE0 346 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 ZC3H11AO75152 810 aaKnown RBP eCLIP16.9■□□□□ 0.3
CTSA-214ENST00000606788 CYP1A1P04798 512 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 ARF4P18085 180 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 COILP38432 576 aaPredicted RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
CTSA-214ENST00000606788 AMHR2Q16671 573 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 LIN9Q5TKA1 542 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 DENND1BQ6P3S1 775 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 PLPPR4Q7Z2D5 763 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 WDR49Q8IV35 697 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 CAPS2Q9BXY5 557 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 NIF3L1Q9GZT8 377 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 MTUS1Q9ULD2 1270 aa16.9■□□□□ 0.3
CTSA-214ENST00000606788 GOLGA6L10A6NI86 522 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 ASB14A6NK59 587 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
CTSA-214ENST00000606788 SNAI1O95863 264 aaPredicted RBP16.89■□□□□ 0.29
CTSA-214ENST00000606788 ITGBL1O95965 494 aaPredicted RBP16.89■□□□□ 0.29
CTSA-214ENST00000606788 PTGIRP43119 386 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 BPIFB4P59827 614 aa16.89■□□□□ 0.29
CTSA-214ENST00000606788 CENPCQ03188 943 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms