RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 OAZ2O95190 189 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 OR4Q2P0C623 313 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 MYL4P12829 197 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 GJA1P17302 382 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 ID4P47928 161 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 AARSP49588 968 aaKnown RBP eCLIP14.31□□□□□ -0.12
RPS28-204ENST00000602140 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
RPS28-204ENST00000602140 KYAT1Q16773 422 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
RPS28-204ENST00000602140 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 ZNF852Q6ZMS4 543 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 USP37Q86T82 979 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 KCNN1Q92952 543 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 PGLYRP2Q96PD5 576 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 TRMT61BQ9BVS5 477 aaKnown RBP14.31□□□□□ -0.12
RPS28-204ENST00000602140 RPF1Q9H9Y2 349 aaKnown RBP14.31□□□□□ -0.12
RPS28-204ENST00000602140 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 ASAH2Q9NR71 780 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 BLOC1S4Q9NUP1 217 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 FBXO4Q9UKT5 387 aa14.31□□□□□ -0.12
RPS28-204ENST00000602140 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
RPS28-204ENST00000602140 SHISA7A6NL88 538 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 NCAM2O15394 837 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 XPOTO43592 962 aaKnown RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 TRAK2O60296 914 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 FAM189A1O60320 539 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 PIGRP01833 764 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 PLCG1P19174 1290 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 MAGEA9P43362 315 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 ZNF131P52739 623 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 EPHA5P54756 1037 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 FOXK2Q01167 660 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 CSTF1Q05048 431 aaKnown RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 GRIN1Q05586 938 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 MCM6Q14566 821 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 KARSQ15046 597 aaKnown RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 ZNF528Q3MIS6 628 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 VITQ6UXI7 678 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 LEMD2Q8NC56 503 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 BEST2Q8NFU1 509 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 DNASE1L2Q92874 299 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 SMARCD2Q92925 531 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 CLDN23Q96B33 292 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 MRPS17Q9Y2R5 130 aaKnown RBP14.3□□□□□ -0.12
RPS28-204ENST00000602140 YIPF1Q9Y548 306 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 CACNA1IQ9P0X4 2223 aa14.3□□□□□ -0.12
RPS28-204ENST00000602140 A0A0B4J269 797 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 PPEF2O14830 753 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 KINO60870 393 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 VNN2O95498 520 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 ADRB2P07550 413 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 PSMC3P17980 439 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 SCP2P22307 547 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 GDI1P31150 447 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 LONP1P36776 959 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 VIPR2P41587 438 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 RPS9P46781 194 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 MCM2P49736 904 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 DUSP4Q13115 394 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 GPR17Q13304 367 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 TEAD2Q15562 447 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 SPATA1Q5VX52 437 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 JADE1Q6IE81 842 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 KIAA2013Q8IYS2 634 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 ZSCAN18Q8TBC5 510 aaPredicted RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 RUBCNQ92622 972 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 RAD54LQ92698 747 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 IRF7Q92985 503 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 TSPAN18Q96SJ8 248 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 CRISPLD1Q9H336 500 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 SLITRK6Q9H5Y7 841 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 UPF2Q9HAU5 1272 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 CPSF3Q9UKF6 684 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 NDRG2Q9UN36 371 aaKnown RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
RPS28-204ENST00000602140 DMXL1Q9Y485 3027 aa14.29□□□□□ -0.12
RPS28-204ENST00000602140 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 TBCAO75347 108 aaKnown RBP14.28□□□□□ -0.12
RPS28-204ENST00000602140 BMP15O95972 392 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 TYMPP19971 482 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
RPS28-204ENST00000602140 EPHB3P54753 998 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 LILRA4P59901 499 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 EP300Q09472 2414 aaPredicted RBP14.28□□□□□ -0.12
RPS28-204ENST00000602140 PLD1Q13393 1074 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 FZD5Q13467 585 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 SF3A1Q15459 793 aaKnown RBP14.28□□□□□ -0.12
RPS28-204ENST00000602140 OVOS1Q6IE37 1185 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 CD302Q8IX05 232 aa14.28□□□□□ -0.12
RPS28-204ENST00000602140 DCLK2Q8N568 766 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms