RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 FGF13Q92913 245 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 DHX58Q96C10 678 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 OXCT2Q9BYC2 517 aaPredicted RBP28.24■■■□□ 2.11
PNKP-216ENST00000601816 AFF4Q9UHB7 1163 aaKnown RBP28.24■■■□□ 2.11
PNKP-216ENST00000601816 KCNH3Q9ULD8 1083 aa28.24■■■□□ 2.11
PNKP-216ENST00000601816 SEC24AO95486 1093 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 PAX3P23760 479 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 CRELD2Q6UXH1 353 aaPredicted RBP28.23■■■□□ 2.11
PNKP-216ENST00000601816 PRSS33Q8NF86 280 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 FGFBP2Q9BYJ0 223 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 KBTBD4Q9NVX7 518 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 INSL5Q9Y5Q6 135 aa28.23■■■□□ 2.11
PNKP-216ENST00000601816 LILRA4P59901 499 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 NHLH1Q02575 133 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 ADCY1Q08828 1119 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 PKP1Q13835 747 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 ATL3Q6DD88 541 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 IQUBQ8NA54 791 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 FAM213AQ9BRX8 229 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 MAFFQ9ULX9 164 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 MRPS23Q9Y3D9 190 aaKnown RBP28.22■■■□□ 2.11
PNKP-216ENST00000601816 NUMBLQ9Y6R0 609 aa28.22■■■□□ 2.11
PNKP-216ENST00000601816 DOCK6Q96HP0 2047 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 ANO9A1A5B4 782 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 IL18RAPO95256 599 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 RHOP08100 348 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 SRFP11831 508 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 ODC1P11926 461 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 TYMPP19971 482 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 PTPN5P54829 565 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 AMPD3Q01432 767 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 STXBP4Q6ZWJ1 553 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 SENP8Q96LD8 212 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 TMEM206Q9H813 350 aa28.21■■■□□ 2.11
PNKP-216ENST00000601816 OR6C75A6NL08 312 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 PIRO00625 290 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 CFHP08603 1231 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 PTPN2P17706 415 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 GARTP22102 1010 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 ME1P48163 572 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 ASTLQ6HA08 431 aaPredicted RBP28.2■■■□□ 2.1
PNKP-216ENST00000601816 OVOS1Q6IE37 1185 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 RNF19BQ6ZMZ0 732 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 MTSS1LQ765P7 747 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 NPAS3Q8IXF0 933 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 SIX5Q8N196 739 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 ST13P5Q8NFI4 369 aaPredicted RBP28.2■■■□□ 2.1
PNKP-216ENST00000601816 SAAL1Q96ER3 474 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 TRIM9Q9C026 710 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 DPP3Q9NY33 737 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 CFAP45Q9UL16 551 aa28.2■■■□□ 2.1
PNKP-216ENST00000601816 ANK1P16157 1881 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 SPTLC1O15269 473 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 PRPF6O94906 941 aaKnown RBP28.19■■■□□ 2.1
PNKP-216ENST00000601816 LDHAP00338 332 aaKnown RBP28.19■■■□□ 2.1
PNKP-216ENST00000601816 ASIC1P78348 528 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 NT5DC4Q86YG4 428 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 EFCAB13Q8IY85 973 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 ELMOD1Q8N336 334 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 FLCNQ8NFG4 579 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 ING5Q8WYH8 240 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 AVENQ9NQS1 362 aaPredicted RBP28.19■■■□□ 2.1
PNKP-216ENST00000601816 WNT16Q9UBV4 365 aa28.19■■■□□ 2.1
PNKP-216ENST00000601816 TULP1O00294 542 aaPredicted RBP28.18■■■□□ 2.1
PNKP-216ENST00000601816 OR4Q2P0C623 313 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 CLCN5P51795 746 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 NUBP1P53384 320 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 PARM1Q6UWI2 310 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 BRSK2Q8IWQ3 736 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 TMEM105Q8N8V8 129 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 FGF14Q92915 247 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 CORO1BQ9BR76 489 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 MAGEF1Q9HAY2 307 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 FAM13BQ9NYF5 915 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 PCDHA7Q9UN72 937 aa28.18■■■□□ 2.1
PNKP-216ENST00000601816 HOXD11P31277 338 aaPredicted RBP28.17■■■□□ 2.1
PNKP-216ENST00000601816 TAF6P49848 677 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 DNM1Q05193 864 aaKnown RBP28.17■■■□□ 2.1
PNKP-216ENST00000601816 TWF1Q12792 350 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 MYBPC2Q14324 1141 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 SLC5A9Q2M3M2 681 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 CWF19L1Q69YN2 538 aaKnown RBP28.17■■■□□ 2.1
PNKP-216ENST00000601816 ARMCX5Q6P1M9 558 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 ZSWIM2Q8NEG5 633 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 HPS3Q969F9 1004 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 PGLYRP2Q96PD5 576 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 CBWD1Q9BRT8 395 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 RBAKQ9NYW8 714 aaPredicted RBP28.17■■■□□ 2.1
PNKP-216ENST00000601816 WDFY4Q6ZS81 3184 aa28.17■■■□□ 2.1
PNKP-216ENST00000601816 POLR2DO15514 142 aaKnown RBP28.16■■■□□ 2.1
PNKP-216ENST00000601816 EXTL3O43909 919 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 TCF15Q12870 199 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 IQCEQ6IPM2 695 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 CNNM4Q6P4Q7 775 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 NOC3LQ8WTT2 800 aaKnown RBP28.16■■■□□ 2.1
PNKP-216ENST00000601816 RPP25Q9BUL9 199 aaKnown RBP28.16■■■□□ 2.1
PNKP-216ENST00000601816 SLC2A4RGQ9NR83 387 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 DSEQ9UL01 958 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 CA14Q9ULX7 337 aa28.16■■■□□ 2.1
PNKP-216ENST00000601816 NOTCH4Q99466 2003 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms