RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 BCO2Q9BYV7 579 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 ZHX3Q9H4I2 956 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 ZFP14Q9HCL3 533 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 CEP72Q9P209 647 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 TIMM13Q9Y5L4 95 aaPredicted RBP18.47■□□□□ 0.55
SCAF1-204ENST00000601038 CACNA1IQ9P0X4 2223 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 FAM170BA6NMN3 283 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.55
SCAF1-204ENST00000601038 SP9P0CG40 484 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 EPHA5P54756 1037 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 UBXN2BQ14CS0 331 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 FAM78AQ5JUQ0 283 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 SPATA1Q5VX52 437 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 SLC39A4Q6P5W5 647 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 DSTYKQ6XUX3 929 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 LARP4BQ92615 738 aaKnown RBP18.46■□□□□ 0.55
SCAF1-204ENST00000601038 LTB4R2Q9NPC1 389 aa18.46■□□□□ 0.55
SCAF1-204ENST00000601038 CPSF3Q9UKF6 684 aaKnown RBP18.46■□□□□ 0.55
SCAF1-204ENST00000601038 MTF2Q9Y483 593 aaPredicted RBP18.46■□□□□ 0.55
SCAF1-204ENST00000601038 OR6C75A6NL08 312 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 LMNAP02545 664 aaKnown RBP18.45■□□□□ 0.54
SCAF1-204ENST00000601038 TYMPP19971 482 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 PAX3P23760 479 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 FCARP24071 287 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 NMT1P30419 496 aaKnown RBP18.45■□□□□ 0.54
SCAF1-204ENST00000601038 MAGEA9P43362 315 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 GUCY2FP51841 1108 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 LILRA4P59901 499 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 GPR17Q13304 367 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 CUL4AQ13619 759 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 ZC3H14Q6PJT7 736 aaKnown RBP18.45■□□□□ 0.54
SCAF1-204ENST00000601038 MAP4K3Q8IVH8 894 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 HS6ST3Q8IZP7 471 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 KCNG4Q8TDN1 519 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 DNASE1L2Q92874 299 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 ASB16Q96NS5 453 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 ST6GALNAC4Q9H4F1 302 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 ASAH2Q9NR71 780 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 R4GN57 208 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 MIA3Q5JRA6 1907 aa18.45■□□□□ 0.54
SCAF1-204ENST00000601038 MOSPD3O75425 235 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 VNN2O95498 520 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 PDCP20941 246 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 CD72P21854 359 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 MYBPC2Q14324 1141 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 OVOS1Q6IE37 1185 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 JADE1Q6IE81 842 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 SLFN12LQ6IEE8 588 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 ZNF852Q6ZMS4 543 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 TPRG1Q6ZUI0 275 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 MAML2Q8IZL2 1156 aaPredicted RBP18.44■□□□□ 0.54
SCAF1-204ENST00000601038 KRI1Q8N9T8 703 aaKnown RBP18.44■□□□□ 0.54
SCAF1-204ENST00000601038 SMARCD2Q92925 531 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 CLDN23Q96B33 292 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 FAM212AQ96EL1 285 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 ZSWIM3Q96MP5 696 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
SCAF1-204ENST00000601038 DERAQ9Y315 318 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 YIPF1Q9Y548 306 aa18.44■□□□□ 0.54
SCAF1-204ENST00000601038 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
SCAF1-204ENST00000601038 ANKRD63C9JTQ0 380 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 NRG2O14511 850 aaPredicted RBP18.43■□□□□ 0.54
SCAF1-204ENST00000601038 PPEF2O14830 753 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 NCAM2O15394 837 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 OR4Q2P0C623 313 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 MYL4P12829 197 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 PLD1Q13393 1074 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 PTPAQ15257 358 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 ZC2HC1CQ53FD0 456 aaPredicted RBP18.43■□□□□ 0.54
SCAF1-204ENST00000601038 C9orf57Q5W0N0 161 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 PGLYRP2Q96PD5 576 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 GPR88Q9GZN0 384 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 ASB7Q9H672 318 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 BRD9Q9H8M2 597 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 HEBP1Q9NRV9 189 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 SPATA6Q9NWH7 488 aaPredicted RBP18.43■□□□□ 0.54
SCAF1-204ENST00000601038 FBXO4Q9UKT5 387 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 MRPS17Q9Y2R5 130 aaKnown RBP18.43■□□□□ 0.54
SCAF1-204ENST00000601038 CLIC4Q9Y696 253 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 STYXL1Q9Y6J8 313 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 COL4A3Q01955 1670 aa18.43■□□□□ 0.54
SCAF1-204ENST00000601038 PIRO00625 290 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 LAMTOR5O43504 91 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 NFICP08651 508 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 PSMC3P17980 439 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 TARSP26639 723 aaKnown RBP18.42■□□□□ 0.54
SCAF1-204ENST00000601038 RPS9P46781 194 aaKnown RBP18.42■□□□□ 0.54
SCAF1-204ENST00000601038 ACOT2P49753 483 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 EPHB3P54753 998 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 POU5F1Q01860 360 aaKnown RBP18.42■□□□□ 0.54
SCAF1-204ENST00000601038 DUSP4Q13115 394 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 GRM2Q14416 872 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 TMEM132DQ14C87 1099 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 ZNF528Q3MIS6 628 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 ADALQ6DHV7 355 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 CENPPQ6IPU0 288 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 USP49Q70CQ1 688 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 ZNF720Q7Z2F6 126 aa18.42■□□□□ 0.54
SCAF1-204ENST00000601038 IRF7Q92985 503 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms