RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PROZP22891 400 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 KPNA1P52294 538 aaPredicted RBP18.33■□□□□ 0.52
USE1-208ENST00000600970 HEATR6Q6AI08 1181 aaKnown RBP18.33■□□□□ 0.52
USE1-208ENST00000600970 C1orf228Q6PIY5 440 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 Q6ZS52 159 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 YAF2Q8IY57 180 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 LRRC3Q9BY71 257 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 C8orf33Q9H7E9 229 aaPredicted RBP18.33■□□□□ 0.52
USE1-208ENST00000600970 PCDHB8Q9UN66 801 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
USE1-208ENST00000600970 NUP210Q8TEM1 1887 aaPredicted RBP18.33■□□□□ 0.52
USE1-208ENST00000600970 GREB1Q4ZG55 1949 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 A0A1W2PRU2 124 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 HOXC13P31276 330 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 FCHO2Q0JRZ9 810 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 ORC2Q13416 577 aaPredicted RBP18.32■□□□□ 0.52
USE1-208ENST00000600970 TXNDC11Q6PKC3 985 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 MPZL3Q6UWV2 235 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 TMC8Q8IU68 726 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 DAW1Q8N136 415 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 FAM160A2Q8N612 972 aaPredicted RBP18.32■□□□□ 0.52
USE1-208ENST00000600970 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 TCHPQ9BT92 498 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 C2orf42Q9NWW7 574 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 ARHGAP28Q9P2N2 729 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
USE1-208ENST00000600970 KIF26AQ9ULI4 1882 aaPredicted RBP18.32■□□□□ 0.52
USE1-208ENST00000600970 SPTBN2O15020 2390 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 EPG5Q9HCE0 2579 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 MYBPHLA2RUH7 354 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 VNN2O95498 520 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
USE1-208ENST00000600970 MARCKSP29966 332 aaPredicted RBP18.31■□□□□ 0.52
USE1-208ENST00000600970 ANAPC15P60006 121 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 GPIHBP1Q8IV16 184 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 ZBTB45Q96K62 511 aaPredicted RBP18.31■□□□□ 0.52
USE1-208ENST00000600970 PGLYRP2Q96PD5 576 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 DNAJC25Q9H1X3 360 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 CRISPLD1Q9H336 500 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 KMT5AQ9NQR1 393 aa18.31■□□□□ 0.52
USE1-208ENST00000600970 DDX19AQ9NUU7 478 aaKnown RBP18.31■□□□□ 0.52
USE1-208ENST00000600970 TPRP12270 2363 aaKnown RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 FOXD2O60548 495 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 HIP1RO75146 1068 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 KCNA4P22459 653 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 CTHP32929 405 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
USE1-208ENST00000600970 YWHAHQ04917 246 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 DMP1Q13316 513 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
USE1-208ENST00000600970 SLC10A6Q3KNW5 377 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 SEZ6Q53EL9 994 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 DGKKQ5KSL6 1271 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 CEP68Q76N32 757 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 RALGPS2Q86X27 583 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 ARID3BQ8IVW6 561 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 TTC8Q8TAM2 541 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 DDX1Q92499 740 aaKnown RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 LRRC3BQ96PB8 259 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 TUBGCP4Q9UGJ1 667 aa18.3■□□□□ 0.52
USE1-208ENST00000600970 RBM19Q9Y4C8 960 aaKnown RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 TIMM13Q9Y5L4 95 aaPredicted RBP18.3■□□□□ 0.52
USE1-208ENST00000600970 ACACBO00763 2458 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 M0QZQ0 153 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 OAZ2O95190 189 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 DUSP4Q13115 394 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 PLD1Q13393 1074 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 PON2Q15165 354 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 WDR5BQ86VZ2 330 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 C4orf32Q8N8J7 132 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 ZFYVE19Q96K21 471 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 MKNK1Q9BUB5 465 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 GTSE1Q9NYZ3 720 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 LRWD1Q9UFC0 647 aa18.29■□□□□ 0.52
USE1-208ENST00000600970 E9PMD0 336 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 SLC16A4O15374 487 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 HOXA6P31267 233 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 EPHB3P54753 998 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 MAPK7Q13164 816 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 CCINQ13939 588 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 SNX29Q8TEQ0 813 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 DRC1Q96MC2 740 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
USE1-208ENST00000600970 OXCT2Q9BYC2 517 aaPredicted RBP18.28■□□□□ 0.52
USE1-208ENST00000600970 TM4SF5O14894 197 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 AXIN1O15169 862 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 LRPAP1P30533 357 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 ALDH1A3P47895 512 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 LIMK1P53667 647 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 SPAG1Q07617 926 aa18.27■□□□□ 0.52
USE1-208ENST00000600970 GPR17Q13304 367 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms