RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
SSBP4-208ENST00000600628 DMDP11532 3685 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ALADP13716 330 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 MTHFRP42898 656 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 FAM160A1Q05DH4 1040 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 MYBPC2Q14324 1141 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 UVSSAQ2YD98 709 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ZCWPW2Q504Y3 356 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
SSBP4-208ENST00000600628 KANK3Q6NY19 840 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 TCEAL8Q8IYN2 117 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 C1orf127Q8N9H9 656 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF461Q8TAF7 563 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 SAAL1Q96ER3 474 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 RPGRIP1Q96KN7 1286 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 FAM213AQ9BRX8 229 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 OXCT2Q9BYC2 517 aaPredicted RBP9.52□□□□□ -0.89
SSBP4-208ENST00000600628 POMKQ9H5K3 350 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 KIAA1586Q9HCI6 787 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 C11orf16Q9NQ32 467 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 INTS13Q9NVM9 706 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 MAFFQ9ULX9 164 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 PTPRDP23468 1912 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ZDBF2Q9HCK1 2354 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 DENND4CQ5VZ89 1909 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 MAPK13O15264 365 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 DCXO43602 365 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 N4BP1O75113 896 aaKnown RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RFPL2O75678 378 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 HNRNPA1P09651 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 ATF2P15336 505 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 OR1D2P34982 312 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 ROR1Q01973 937 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 CYP24A1Q07973 514 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RARS2Q5T160 578 aaKnown RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 TPGS2Q68CL5 300 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 TMC5Q6UXY8 1006 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 SYCP3Q8IZU3 236 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 GUF1Q8N442 669 aaKnown RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 PLEKHO2Q8TD55 490 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RIPOR3Q96MK2 946 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RTP3Q9BQQ7 232 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 PCIF1Q9H4Z3 704 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 PDE11AQ9HCR9 933 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 WDR6Q9NNW5 1121 aaKnown RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 AVENQ9NQS1 362 aaPredicted RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 GDAP2Q9NXN4 497 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 DPP3Q9NY33 737 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 RBAKQ9NYW8 714 aaPredicted RBP9.51□□□□□ -0.89
SSBP4-208ENST00000600628 FBXL5Q9UKA1 691 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 CDY1Q9Y6F8 540 aa9.51□□□□□ -0.89
SSBP4-208ENST00000600628 MYO15AQ9UKN7 3530 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GOLGA8IPA6NC78 632 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 ZNF233A6NK53 670 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GOLGA8JA6NMD2 632 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GABRDO14764 452 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GPR37L1O60883 481 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 WEE2P0C1S8 567 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 ENPEPQ07075 957 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 PSMD6Q15008 389 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 SNRNP35Q16560 246 aaKnown RBP9.5□□□□□ -0.89
SSBP4-208ENST00000600628 TMEM31Q5JXX7 168 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 C1orf220Q5T0J3 134 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 CEP57Q86XR8 500 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 PALB2Q86YC2 1186 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 WDR49Q8IV35 697 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 ZC3H3Q8IXZ2 948 aaKnown RBP9.5□□□□□ -0.89
SSBP4-208ENST00000600628 ZDHHC14Q8IZN3 488 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 LRRC52Q8N7C0 313 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 APPL2Q8NEU8 664 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 OR5B17Q8NGF7 314 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GOLGA5Q8TBA6 731 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 SPATA18Q8TC71 538 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 PARD3BQ8TEW8 1205 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 FAM84AQ96KN4 292 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GSDMAQ96QA5 445 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 PKMYT1Q99640 499 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 EXOC1Q9NV70 894 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 HSFX1Q9UBD0 423 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 MUTYHQ9UIF7 546 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 ITGA11Q9UKX5 1188 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 GREB1Q4ZG55 1949 aa9.5□□□□□ -0.89
SSBP4-208ENST00000600628 C2CD4DB7Z1M9 353 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 H7C4K7 107 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 SEC24AO95486 1093 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
SSBP4-208ENST00000600628 SPATA31D3P0C874 917 aa9.49□□□□□ -0.89
SSBP4-208ENST00000600628 MCM4P33991 863 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms