RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 SLC22A17Q8WUG5 538 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
SNRPA-208ENST00000600456 NELFBQ8WX92 580 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 CASP10Q92851 521 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 OXCT2Q9BYC2 517 aaPredicted RBP14.9□□□□□ -0.02
SNRPA-208ENST00000600456 DPP7Q9UHL4 492 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 DSEQ9UL01 958 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 HCFC2Q9Y5Z7 792 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 MYO7AQ13402 2215 aa14.9□□□□□ -0.02
SNRPA-208ENST00000600456 KPNA7A9QM74 516 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 SPTLC1O15269 473 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 LINC01565O15544 149 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 GLP2RO95838 553 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 EPB41P11171 864 aaKnown RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 ODC1P11926 461 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 PTMSP20962 102 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 LTBRP36941 435 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 CLCN4P51793 760 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 VAMP7P51809 220 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 PMS1P54277 932 aaKnown RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 MCCD1P59942 119 aaPredicted RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 PAK1Q13153 545 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 MRPL58Q14197 206 aaKnown RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 LMBRD2Q68DH5 695 aaPredicted RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 TTI2Q6NXR4 508 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 ELMSAN1Q6PJG2 1045 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 PRSS55Q6UWB4 352 aaPredicted RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 TMEM130Q8N3G9 435 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 PLEKHO2Q8TD55 490 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 SENP8Q96LD8 212 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 CEP63Q96MT8 703 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
SNRPA-208ENST00000600456 DZANK1Q9NVP4 752 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 SIX4Q9UIU6 781 aa14.89□□□□□ -0.03
SNRPA-208ENST00000600456 TRIM49BA6NDI0 452 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
SNRPA-208ENST00000600456 TBX10O75333 385 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 OAZ2O95190 189 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 GLUD1P00367 558 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 CYP11A1P05108 521 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 KRT19P08727 400 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 HOXB8P17481 243 aaPredicted RBP14.88□□□□□ -0.03
SNRPA-208ENST00000600456 KCNA5P22460 613 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 YWHAHQ04917 246 aaPredicted RBP14.88□□□□□ -0.03
SNRPA-208ENST00000600456 BFSP1Q12934 665 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 MYO1EQ12965 1108 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 PUS10Q3MIT2 529 aaKnown RBP14.88□□□□□ -0.03
SNRPA-208ENST00000600456 LEXMQ3ZCV2 418 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 SLC8B1Q6J4K2 584 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 RBM43Q6ZSC3 357 aaKnown RBP14.88□□□□□ -0.03
SNRPA-208ENST00000600456 EP400NLQ6ZTU2 488 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 VN1R2Q8NFZ6 395 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 HDAC7Q8WUI4 952 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 ZNF516Q92618 1163 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 BORCS6Q96GS4 357 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 CLSTN3Q9BQT9 956 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 PRDM6Q9NQX0 595 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 GDAP2Q9NXN4 497 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 DACH1Q9UI36 760 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
SNRPA-208ENST00000600456 COL6A3P12111 3177 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 TBC1D4O60343 1298 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 STX10O60499 249 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 STAU1O95793 577 aaKnown RBP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 GTF2H1P32780 548 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 MRPS5P82675 430 aaKnown RBP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 TRPC3Q13507 836 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 RAB33AQ14088 237 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 ZACNQ401N2 412 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 CCDC183Q5T5S1 534 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 LLGL2Q6P1M3 1020 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 METTL23Q86XA0 190 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 SPATA18Q8TC71 538 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 HPDLQ96IR7 371 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 MSLNLQ96KJ4 702 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 FAM84AQ96KN4 292 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 DUSP9Q99956 384 aaKnown RBP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 METTL14Q9HCE5 456 aaKnown RBP14.87□□□□□ -0.03
SNRPA-208ENST00000600456 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 RWDD2AQ9UIY3 292 aa14.87□□□□□ -0.03
SNRPA-208ENST00000600456 OR6C75A6NL08 312 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 CYB561D2O14569 222 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 PHACTR2O75167 634 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 FGFR1OPO95684 399 aaKnown RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 GNA14O95837 355 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 C4BPAP04003 597 aaKnown RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 EPCAMP16422 314 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 RPL17P18621 184 aaKnown RBP14.86□□□□□ -0.03
SNRPA-208ENST00000600456 ATICP31939 592 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 OR1D2P34982 312 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 NLRP12P59046 1061 aa14.86□□□□□ -0.03
SNRPA-208ENST00000600456 DLG4P78352 724 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms