RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PIRO00625 290 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 PI15O43692 258 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 CPB1P15086 417 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 STAT6P42226 847 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 ACOT2P49753 483 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 LILRA4P59901 499 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 ADCY1Q08828 1119 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 ALCAMQ13740 583 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
VRK3-221ENST00000600284 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 LEMD2Q8NC56 503 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 ZNF396Q96N95 335 aaPredicted RBP17.14■□□□□ 0.33
VRK3-221ENST00000600284 ACCSQ96QU6 501 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 RPP25Q9BUL9 199 aaKnown RBP17.14■□□□□ 0.33
VRK3-221ENST00000600284 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 FRMD3A2A2Y4 597 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 STK25O00506 426 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 PPP6R2O75170 966 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 ECI2O75521 394 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 GPC5P78333 572 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 GPR17Q13304 367 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 MYBPC2Q14324 1141 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 STK38Q15208 465 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 PRSS36Q5K4E3 855 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 C9orf57Q5W0N0 161 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 IQCEQ6IPM2 695 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 RNF19BQ6ZMZ0 732 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 CCDC105Q8IYK2 499 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 POMGNT1Q8WZA1 660 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 SHDQ96IW2 340 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 ZNF512Q96ME7 567 aaPredicted RBP17.13■□□□□ 0.33
VRK3-221ENST00000600284 PHOX2BQ99453 314 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 LRRC27Q9C0I9 530 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 ARHGEF3Q9NR81 526 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 CA14Q9ULX7 337 aa17.13■□□□□ 0.33
VRK3-221ENST00000600284 TIMM13Q9Y5L4 95 aaPredicted RBP17.13■□□□□ 0.33
VRK3-221ENST00000600284 TISP43B9A030 160 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 PROB1E7EW31 1015 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 SPTLC2O15270 562 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 IL18RAPO95256 599 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 LDHAP00338 332 aaKnown RBP17.12■□□□□ 0.33
VRK3-221ENST00000600284 NFICP08651 508 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 ODC1P11926 461 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 RFX1P22670 979 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 ADSSP30520 456 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 STARD6P59095 220 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 PFKPQ01813 784 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 PLD1Q13393 1074 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 OVOS1Q6IE37 1185 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
VRK3-221ENST00000600284 PDZD4Q76G19 769 aaPredicted RBP17.12■□□□□ 0.33
VRK3-221ENST00000600284 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 SENP8Q96LD8 212 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 DSEQ9UL01 958 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 NOTCH4Q99466 2003 aa17.12■□□□□ 0.33
VRK3-221ENST00000600284 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 A0A087X0B3 334 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 PPEF2O14830 753 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 GCNT3O95395 438 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 YEATS4O95619 227 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 CYP11A1P05108 521 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 IDEP14735 1019 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 GARTP22102 1010 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 EPHA5P54756 1037 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 TWF1Q12792 350 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 DTWD2Q8NBA8 298 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 ING5Q8WYH8 240 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 MCRS1Q96EZ8 462 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 DPP3Q9NY33 737 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 TBC1D7Q9P0N9 293 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 HSFX1Q9UBD0 423 aa17.11■□□□□ 0.33
VRK3-221ENST00000600284 SPTLC1O15269 473 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 NBL1P41271 181 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 TAF6P49848 677 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 AMPD3Q01432 767 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 PRKCQQ04759 706 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 KCNA1Q09470 495 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 ST13P5Q8NFI4 369 aaPredicted RBP17.1■□□□□ 0.33
VRK3-221ENST00000600284 ELSPBP1Q96BH3 223 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 FAM86C1Q9NVL1 165 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 KBTBD4Q9NVX7 518 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 CEP72Q9P209 647 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
VRK3-221ENST00000600284 KIAA0391O15091 583 aaKnown RBP17.09■□□□□ 0.33
VRK3-221ENST00000600284 CUTAO60888 179 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms