RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PTMSP20962 102 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 LTBRP36941 435 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 GLUD2P49448 558 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 RBP5P82980 135 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 ADAM15Q13444 863 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 CCDC85BQ15834 202 aaPredicted RBP14.82□□□□□ -0.04
VRK3-219ENST00000600137 DUSP6Q16828 381 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
VRK3-219ENST00000600137 FRMD5Q7Z6J6 570 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 SLC22A17Q8WUG5 538 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 RIN2Q8WYP3 895 aaPredicted RBP14.82□□□□□ -0.04
VRK3-219ENST00000600137 SLC35C1Q96A29 364 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 KLHL5Q96PQ7 755 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 GDAP2Q9NXN4 497 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 PCDHB8Q9UN66 801 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 NUB1Q9Y5A7 615 aa14.82□□□□□ -0.04
VRK3-219ENST00000600137 TSC2P49815 1807 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 KPNA7A9QM74 516 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 C2CD2LO14523 706 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 SYN3O14994 580 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TEX28O15482 410 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 LINC01565O15544 149 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TRAPPC3O43617 180 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 STAU1O95793 577 aaKnown RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 GLP2RO95838 553 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TNNC2P02585 160 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 PAX3P23760 479 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 NRIP1P48552 1158 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TAF6P49848 677 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 AP3M2P53677 418 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 RBM10P98175 930 aaKnown RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 LILRA6Q6PI73 481 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 RBM23Q86U06 439 aaKnown RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 TRIM59Q8IWR1 403 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 MAFAQ8NHW3 353 aaPredicted RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 ELMO3Q96BJ8 720 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TLE6Q9H808 572 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 MRPL17Q9NRX2 175 aaKnown RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 FNIP2Q9P278 1114 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 MTRRQ9UBK8 725 aa14.81□□□□□ -0.04
VRK3-219ENST00000600137 TIMM13Q9Y5L4 95 aaPredicted RBP14.81□□□□□ -0.04
VRK3-219ENST00000600137 PLXNA3P51805 1871 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 TULP1O00294 542 aaPredicted RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 OAZ2O95190 189 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 CYP11A1P05108 521 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 URODP06132 367 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 RPL17P18621 184 aaKnown RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 TYMPP19971 482 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 GCLMP48507 274 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 MYL6P60660 151 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 TYRO3Q06418 890 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 DLX2Q07687 328 aaPredicted RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 SKOR2Q2VWA4 1001 aaPredicted RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 VARS2Q5ST30 1063 aaKnown RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 TMEM184AQ6ZMB5 413 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 MICALL1Q8N3F8 863 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 EFHBQ8N7U6 833 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 ENOX1Q8TC92 643 aaKnown RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 RTP3Q9BQQ7 232 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 VRTNQ9H8Y1 702 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 PRDM6Q9NQX0 595 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 ARMCX3Q9UH62 379 aaPredicted RBP14.8□□□□□ -0.04
VRK3-219ENST00000600137 BACE2Q9Y5Z0 518 aa14.8□□□□□ -0.04
VRK3-219ENST00000600137 CYB561D2O14569 222 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 KRT19P08727 400 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 KRT13P13646 458 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 GTF2H1P32780 548 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 PNPLA4P41247 253 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 NCAPHQ15003 741 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 PSMD5Q16401 504 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 SOWAHAQ2M3V2 549 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 SV2CQ496J9 727 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 CBWD6Q4V339 395 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 CBWD3Q5JTY5 395 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 CBWD5Q5RIA9 395 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 KIAA1841Q6NSI8 718 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 TAS1R2Q8TE23 839 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 SEMA4DQ92854 862 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 HPDLQ96IR7 371 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 METTL14Q9HCE5 456 aaKnown RBP14.79□□□□□ -0.04
VRK3-219ENST00000600137 TMEM8AQ9HCN3 771 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 ANO10Q9NW15 660 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 CLEC1BQ9P126 229 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 L1RE1Q9UN81 338 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 SSX2IPQ9Y2D8 614 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 COQ4Q9Y3A0 265 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 MTCL1Q9Y4B5 1905 aaKnown RBP14.79□□□□□ -0.04
VRK3-219ENST00000600137 NME7Q9Y5B8 376 aa14.79□□□□□ -0.04
VRK3-219ENST00000600137 GABRDO14764 452 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 PMM2O15305 246 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 ASS1P00966 412 aaKnown RBP14.78□□□□□ -0.04
VRK3-219ENST00000600137 HLA-DRAP01903 254 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms