RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 KRT19P08727 400 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 ODC1P11926 461 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 DNAJB1P25685 340 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 EEF1GP26641 437 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 ERVFC1P60507 584 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 DLG4P78352 724 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 BIRC3Q13489 604 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 SGSM1Q2NKQ1 1148 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 C1orf220Q5T0J3 134 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 KIAA0319Q5VV43 1072 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 HPDLQ96IR7 371 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 FUCA2Q9BTY2 467 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 EMILIN2Q9BXX0 1053 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 IMPG2Q9BZV3 1241 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 RXFP1Q9HBX9 757 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 FNIP2Q9P278 1114 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 MAGEC2Q9UBF1 373 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.44
SHKBP1-219ENST00000599575 SMTNL1A8MU46 457 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 F8W810 466 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 H7C4K7 107 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 LILRB3O75022 631 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 CXCL14O95715 111 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 CYP11A1P05108 521 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 P4HA1P13674 534 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 FOSL2P15408 326 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 MXI1P50539 228 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 NCOA4Q13772 614 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 ADGRE1Q14246 886 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 TDRD10Q5VZ19 366 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 LMBRD2Q68DH5 695 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 DSTYKQ6XUX3 929 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 PPFIBP1Q86W92 1011 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 TMEM86AQ8N2M4 240 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 CCDC150Q8NCX0 1101 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 HASPINQ8TF76 798 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 DNAJC25Q9H1X3 360 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 FAM124BQ9H5Z6 455 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 COQ4Q9Y3A0 265 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 NFE2L3Q9Y4A8 694 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 BACE2Q9Y5Z0 518 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 PDCD11Q14690 1871 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 KIAA1671Q9BY89 1806 aa17.82■□□□□ 0.44
SHKBP1-219ENST00000599575 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 OAZ2O95190 189 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 TRIM49P0CI25 452 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 TRIM49CP0CI26 452 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 IGFBP4P22692 258 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 GCLMP48507 274 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 ZNF165P49910 485 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 PPP3CAQ08209 521 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 ANO6Q4KMQ2 910 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 DCAF17Q5H9S7 520 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 METTL23Q86XA0 190 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 IRF2BP1Q8IU81 584 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 TOP6BLQ8N6T0 577 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 FBXL13Q8NEE6 735 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 MYLIPQ8WY64 445 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 SENP8Q96LD8 212 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 CNOT6LQ96LI5 555 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 DPP7Q9UHL4 492 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
SHKBP1-219ENST00000599575 PPEF2O14830 753 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 SPTLC1O15269 473 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 HUS1O60921 280 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 CST3P01034 146 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 ADH1AP07327 375 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 BRCC3P46736 316 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 MRPL58Q14197 206 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 SMYD5Q6GMV2 418 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 C11orf57Q6ZUT1 292 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 ANKRD20A12PQ8NF67 263 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 LNX1Q8TBB1 728 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 ANK1P16157 1881 aa17.8■□□□□ 0.44
SHKBP1-219ENST00000599575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 CYB561D2O14569 222 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 ASS1P00966 412 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 AFPP02771 609 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 IRS1P35568 1242 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 FMO5P49326 533 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 NDUFV1P49821 464 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 RTP2Q5QGT7 225 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 CDKAL1Q5VV42 579 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 PLPP4Q5VZY2 271 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 ZNF280DQ6N043 979 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 ELMSAN1Q6PJG2 1045 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 LIMS2Q7Z4I7 341 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 CEP57Q86XR8 500 aa17.79■□□□□ 0.44
SHKBP1-219ENST00000599575 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms