RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.89□□□□□ -0.51
ZNF544-213ENST00000599227 NSMCE1Q8WV22 266 aa11.89□□□□□ -0.51
ZNF544-213ENST00000599227 BSNDQ8WZ55 320 aa11.89□□□□□ -0.51
ZNF544-213ENST00000599227 RBM15Q96T37 977 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZNF544-213ENST00000599227 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
ZNF544-213ENST00000599227 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
ZNF544-213ENST00000599227 USP15Q9Y4E8 981 aaPredicted RBP11.89□□□□□ -0.51
ZNF544-213ENST00000599227 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
ZNF544-213ENST00000599227 LAMB2P55268 1798 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TLR3O15455 904 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 NEBLO76041 1014 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ATP6V1G2O95670 118 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 KRT1P04264 644 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 VIL1P09327 827 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TCF4P15884 667 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 CCND2P30279 289 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ZNF131P52739 623 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 NRLP54845 237 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 OVGP1Q12889 678 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 GPS1Q13098 491 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 BBS9Q3SYG4 887 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 NSUN6Q8TEA1 469 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 PARD3BQ8TEW8 1205 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ZNF317Q96PQ6 595 aaPredicted RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 IDI2Q9BXS1 227 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TBX20Q9UMR3 447 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 CCNE2O96020 404 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 CETPP11597 493 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TARSP26639 723 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ELF1P32519 619 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TAS2R40P59535 323 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 CDR2Q01850 454 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 FASTKD3Q14CZ7 662 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 FOXR2Q6PJQ5 311 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 SPATA21Q7Z572 469 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ZBED8Q8IZ13 594 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 KLK14Q9P0G3 267 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 PDGFRBP09619 1106 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 PHKA2P46019 1235 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 OLIG1Q8TAK6 271 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 SNF8Q96H20 258 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 FHDC1Q9C0D6 1143 aaPredicted RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 G3BP2Q9UN86 482 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 INPP5FQ9Y2H2 1132 aa11.88□□□□□ -0.51
ZNF544-213ENST00000599227 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
ZNF544-213ENST00000599227 HLA-DRAP01903 254 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 TNFSF9P41273 254 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 KCTD2Q14681 263 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HEXIM2Q96MH2 286 aaKnown RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 MAD1L1Q9Y6D9 718 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 SNX3O60493 162 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 VTNP04004 478 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 GNA15P30679 374 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HOXA7P31268 230 aaPredicted RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 RPL7AP62424 266 aaKnown RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HHATQ5VTY9 493 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 ACAD10Q6JQN1 1059 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 KDELC2Q7Z4H8 507 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 DPP9Q86TI2 863 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 PGM2Q96G03 612 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 OSBPL8Q9BZF1 889 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 ANP32DO95626 131 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 PSAPP07602 524 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 KRT16P08779 473 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HSPA6P17066 643 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 ARSEP51690 589 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 PGM5Q15124 567 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 ZNF568Q3ZCX4 644 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 PAN2Q504Q3 1202 aaKnown RBP11.87□□□□□ -0.51
ZNF544-213ENST00000599227 USP37Q86T82 979 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 CPB2Q96IY4 423 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 GPATCH2LQ9NWQ4 482 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HAO1Q9UJM8 370 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 HES2Q9Y543 173 aa11.87□□□□□ -0.51
ZNF544-213ENST00000599227 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
ZNF544-213ENST00000599227 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms