RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 CYP24A1Q07973 514 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 RAB33AQ14088 237 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 CTXN3Q4LDR2 81 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 LMBRD2Q68DH5 695 aaPredicted RBP14.97□□□□□ -0.01
UPF1-205ENST00000598209 ZNF280DQ6N043 979 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 C1orf127Q8N9H9 656 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 FEZF2Q8TBJ5 459 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 SENP8Q96LD8 212 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
UPF1-205ENST00000598209 MTMR12Q9C0I1 747 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
UPF1-205ENST00000598209 FBXW11Q9UKB1 542 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 MAPK8IP1Q9UQF2 711 aa14.97□□□□□ -0.01
UPF1-205ENST00000598209 TIMM13Q9Y5L4 95 aaPredicted RBP14.97□□□□□ -0.01
UPF1-205ENST00000598209 PTPRJQ12913 1337 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 TNFRSF10AO00220 468 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 TBC1D4O60343 1298 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 RFPL2O75678 378 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 SMC2O95347 1197 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ITGB3P05106 788 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ODC1P11926 461 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 POLR2BP30876 1174 aaKnown RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 YWHAHQ04917 246 aaPredicted RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 PSMD6Q15008 389 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ATAT1Q5SQI0 421 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 SLC8B1Q6J4K2 584 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 GPR149Q86SP6 731 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 USP37Q86T82 979 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 GJD3Q8N144 294 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 GUF1Q8N442 669 aaKnown RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 CSGALNACT2Q8N6G5 542 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 CMASQ8NFW8 434 aaPredicted RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 ERCC4Q92889 916 aaPredicted RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 SMARCE1Q969G3 411 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ANKRD36BP1Q96IX9 119 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ZNF560Q96MR9 790 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 NECTIN4Q96NY8 510 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 GSDMAQ96QA5 445 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 FNBP1Q96RU3 617 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 POP1Q99575 1024 aaKnown RBP14.96□□□□□ -0.01
UPF1-205ENST00000598209 POMKQ9H5K3 350 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 CD320Q9NPF0 282 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 INTS13Q9NVM9 706 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 DMAC2Q9NW81 257 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 RMND1Q9NWS8 449 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 FBXL5Q9UKA1 691 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 ITGA11Q9UKX5 1188 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 AGAP1Q9UPQ3 857 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 PCDHA5Q9Y5H7 936 aa14.96□□□□□ -0.01
UPF1-205ENST00000598209 CCDC195A0A1B0GUA6 201 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 C19orf67A6NJJ6 358 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 CALUO43852 315 aaPredicted RBP14.95□□□□□ -0.02
UPF1-205ENST00000598209 ZMYND10O75800 440 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 OAZ2O95190 189 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 NR3C1P04150 777 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 DLATP10515 647 aaKnown RBP14.95□□□□□ -0.02
UPF1-205ENST00000598209 TYMPP19971 482 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 PNPLA4P41247 253 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 ARPP19P56211 112 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 UBE2HP62256 183 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 ROR1Q01973 937 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 SV2CQ496J9 727 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 LIN9Q5TKA1 542 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 C15orf39Q6ZRI6 1047 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 WDR49Q8IV35 697 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 SLC9A9Q8IVB4 645 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 ELOA2Q8IYF1 753 aaPredicted RBP14.95□□□□□ -0.02
UPF1-205ENST00000598209 SMYD4Q8IYR2 804 aaPredicted RBP14.95□□□□□ -0.02
UPF1-205ENST00000598209 OR5B17Q8NGF7 314 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 CCDC127Q96BQ5 260 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 MFSD14AQ96MC6 490 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 CGRRF1Q99675 332 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 ZDHHC7Q9NXF8 308 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 SIX4Q9UIU6 781 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 TRAF3IP3Q9Y228 551 aa14.95□□□□□ -0.02
UPF1-205ENST00000598209 ARHGEF37A1IGU5 675 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 WDR27A2RRH5 827 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 KPNA7A9QM74 516 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 CYB561D2O14569 222 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 TNNC2P02585 160 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 C8AP07357 584 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 KRT19P08727 400 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 TNNI1P19237 187 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 RBP5P82980 135 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 MYBPC2Q14324 1141 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 DUOXA2Q1HG44 320 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
UPF1-205ENST00000598209 SCARA3Q6AZY7 606 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 OVOS1Q6IE37 1185 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 LRRC52Q8N7C0 313 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 ZNF461Q8TAF7 563 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 CXorf38Q8TB03 319 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 SPATA20Q8TB22 786 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 TMEM174Q8WUU8 243 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 SMG7Q92540 1137 aaKnown RBP14.94□□□□□ -0.02
UPF1-205ENST00000598209 BORCS6Q96GS4 357 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 RPGRIP1Q96KN7 1286 aa14.94□□□□□ -0.02
UPF1-205ENST00000598209 CUL9Q8IWT3 2517 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms