RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 COMTP21964 271 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 TMEM62Q0P6H9 643 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 HIC1Q14526 733 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 PKN2Q16513 984 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 KIZQ2M2Z5 673 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 LLGL2Q6P1M3 1020 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 KRT35Q92764 455 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 ANKRD36BP1Q96IX9 119 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 NIF3L1Q9GZT8 377 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 FAM49AQ9H0Q0 323 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 ST7Q9NRC1 585 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 STIM2Q9P246 746 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 SIX4Q9UIU6 781 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 PRDM4Q9UKN5 801 aa18.21■□□□□ 0.51
SHKBP1-216ENST00000598201 IL18RAPO95256 599 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 TNNC2P02585 160 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 GLI1P08151 1106 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 CD58P19256 250 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 GRK4P32298 578 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 MARCKSL1P49006 195 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 HDXQ7Z353 690 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 PHLDB2Q86SQ0 1253 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 KLHL7Q8IXQ5 586 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 CALR3Q96L12 384 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 KAT6AQ92794 2004 aa18.2■□□□□ 0.5
SHKBP1-216ENST00000598201 THAP12O43422 761 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 IGHA2P01877 340 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ITGA4P13612 1032 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ASPAP45381 313 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 CENPCQ03188 943 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ZNF211Q13398 564 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 GLE1Q53GS7 698 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 JADE1Q6IE81 842 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 SCARA5Q6ZMJ2 495 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 C1orf127Q8N9H9 656 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ADAMTS10Q9H324 1103 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 CISHQ9NSE2 258 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 UVRAGQ9P2Y5 699 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ZSCAN5CA6NGD5 496 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 RRN3P2A6NIE6 340 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 RRM1P23921 792 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 NOMO3P69849 1222 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 CASP8Q14790 479 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 SLC10A6Q3KNW5 377 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 MFSD14CQ5VZR4 134 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 MON1BQ7L1V2 547 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ZNF410Q86VK4 478 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ZBTB9Q96C00 473 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 GDAP1L1Q96MZ0 367 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 RPS6KC1Q96S38 1066 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 ZSWIM1Q9BR11 485 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 TRIM7Q9C029 511 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 CDHR5Q9HBB8 845 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 GINS2Q9Y248 185 aa18.19■□□□□ 0.5
SHKBP1-216ENST00000598201 A0A1B0GUA9 196 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 RAD51CO43502 376 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 ERLIN2O94905 339 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 KRT19P08727 400 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 NSFP46459 744 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 ZNF394Q53GI3 561 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 AADACL2Q6P093 401 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 RUFY4Q6ZNE9 571 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 CXorf38Q8TB03 319 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 CD101Q93033 1021 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 UBXN6Q9BZV1 441 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 CARD9Q9H257 536 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 TTC7AQ9ULT0 858 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 NR2E1Q9Y466 385 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 KRIT1O00522 736 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 GPR32O75388 356 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 FGGP02679 453 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 HMGCRP04035 888 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 TNNC1P63316 161 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 BEX3Q00994 111 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 MFSD10Q14728 455 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 RUBCNQ92622 972 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 NRCAMQ92823 1304 aa18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 NXF1Q9UBU9 619 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-216ENST00000598201 MROH7Q68CQ1 1323 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 HEXIM1O94992 359 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 PEX5P50542 639 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 TRIM32Q13049 653 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 MAP9Q49MG5 647 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 TRIM72Q6ZMU5 477 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 AENQ8WTP8 325 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 C11orf70Q9BRQ4 267 aa18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 AVENQ9NQS1 362 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-216ENST00000598201 ESYT3A0FGR9 886 aa18.16■□□□□ 0.5
SHKBP1-216ENST00000598201 MBLAC1A4D2B0 266 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-216ENST00000598201 MIF4GDA9UHW6 222 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-216ENST00000598201 ITGB3P05106 788 aa18.16■□□□□ 0.5
SHKBP1-216ENST00000598201 BRD2P25440 801 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms