RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 HS2ST1Q7LGA3 356 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 ZNF707Q96C28 371 aaPredicted RBP22.81■■□□□ 1.24
PNKP-209ENST00000596726 RPGRIP1Q96KN7 1286 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 PDE11AQ9HCR9 933 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 FBXL5Q9UKA1 691 aa22.81■■□□□ 1.24
PNKP-209ENST00000596726 TSC2P49815 1807 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 OAZ2O95190 189 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 TYMPP19971 482 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 ROR1Q01973 937 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 KCNB1Q14721 858 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 DSTYKQ6XUX3 929 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 NOC3LQ8WTT2 800 aaKnown RBP22.8■■□□□ 1.24
PNKP-209ENST00000596726 CACTINQ8WUQ7 758 aaKnown RBP22.8■■□□□ 1.24
PNKP-209ENST00000596726 BORCS6Q96GS4 357 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 SENP8Q96LD8 212 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 PRKD2Q9BZL6 878 aa22.8■■□□□ 1.24
PNKP-209ENST00000596726 ABLIM3O94929 683 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 TFAMQ00059 246 aaKnown RBP22.79■■□□□ 1.24
PNKP-209ENST00000596726 SURF1Q15526 300 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 CTXN3Q4LDR2 81 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 ZNF280DQ6N043 979 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 RTL10Q7L3V2 364 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 RNF135Q8IUD6 432 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 C1orf127Q8N9H9 656 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 XXYLT1Q8NBI6 393 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 ZNF461Q8TAF7 563 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 CXorf38Q8TB03 319 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 TMEM174Q8WUU8 243 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 KCTD10Q9H3F6 313 aa22.79■■□□□ 1.24
PNKP-209ENST00000596726 TIMM13Q9Y5L4 95 aaPredicted RBP22.79■■□□□ 1.24
PNKP-209ENST00000596726 MYO10Q9HD67 2058 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 WDR27A2RRH5 827 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 PI4K2BG5E9Z4 385 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 C8AP07357 584 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 HOXA9P31269 272 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 TAF6P49848 677 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 CYP2J2P51589 502 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 YWHAHQ04917 246 aaPredicted RBP22.78■■□□□ 1.24
PNKP-209ENST00000596726 FAM160A1Q05DH4 1040 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 SNRNP35Q16560 246 aaKnown RBP22.78■■□□□ 1.24
PNKP-209ENST00000596726 UVSSAQ2YD98 709 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 GOLGA5Q8TBA6 731 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 SMG7Q92540 1137 aaKnown RBP22.78■■□□□ 1.24
PNKP-209ENST00000596726 CCDC47Q96A33 483 aaKnown RBP22.78■■□□□ 1.24
PNKP-209ENST00000596726 CCDC34Q96HJ3 373 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 OXCT2Q9BYC2 517 aaPredicted RBP22.78■■□□□ 1.24
PNKP-209ENST00000596726 EPHX3Q9H6B9 360 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 INTS13Q9NVM9 706 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 DMAC2Q9NW81 257 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 CHMP5Q9NZZ3 219 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 NR2E1Q9Y466 385 aa22.78■■□□□ 1.24
PNKP-209ENST00000596726 CYP11A1P05108 521 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 HNRNPA1P09651 372 aaKnown RBP eCLIP22.77■■□□□ 1.24
PNKP-209ENST00000596726 ODC1P11926 461 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 ANP32AP39687 249 aaKnown RBP22.77■■□□□ 1.24
PNKP-209ENST00000596726 LIN9Q5TKA1 542 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 SCARA3Q6AZY7 606 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 RDH13Q8NBN7 331 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 FAM84AQ96KN4 292 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 TIGD1Q96MW7 591 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 WDR6Q9NNW5 1121 aaKnown RBP22.77■■□□□ 1.24
PNKP-209ENST00000596726 USTQ9Y2C2 406 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 PTPRJQ12913 1337 aa22.77■■□□□ 1.24
PNKP-209ENST00000596726 ARHGEF37A1IGU5 675 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 C2CD4DB7Z1M9 353 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 PDXKO00764 312 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 ITGB3P05106 788 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 POU2F2P09086 479 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 ATF2P15336 505 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 POLR2BP30876 1174 aaKnown RBP22.76■■□□□ 1.23
PNKP-209ENST00000596726 CYP24A1Q07973 514 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 PPM1LQ5SGD2 360 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 TPGS2Q68CL5 300 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 OVOS1Q6IE37 1185 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 USP37Q86T82 979 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 SLC9A9Q8IVB4 645 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 OR5B17Q8NGF7 314 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 SLC7A14Q8TBB6 771 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 MFSD14AQ96MC6 490 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 MTMR12Q9C0I1 747 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 SIX4Q9UIU6 781 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 ITGA11Q9UKX5 1188 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 AGAP1Q9UPQ3 857 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 DOCK8Q8NF50 2099 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 TRIOO75962 3097 aa22.76■■□□□ 1.23
PNKP-209ENST00000596726 NOTCH4Q99466 2003 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 CYB561D2O14569 222 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 SP100P23497 879 aaPredicted RBP22.75■■□□□ 1.23
PNKP-209ENST00000596726 PNPLA4P41247 253 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 ARPP19P56211 112 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 PNOCQ13519 176 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 PSMD6Q15008 389 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 SV2CQ496J9 727 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 LMBRD2Q68DH5 695 aaPredicted RBP22.75■■□□□ 1.23
PNKP-209ENST00000596726 CCDC149Q6ZUS6 474 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 WDR49Q8IV35 697 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 CSGALNACT2Q8N6G5 542 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 LRRC52Q8N7C0 313 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 ANKRD36BP1Q96IX9 119 aa22.75■■□□□ 1.23
PNKP-209ENST00000596726 ZNF560Q96MR9 790 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms