RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ADAM12O43184 909 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 ERLIN2O94905 339 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 FOXC1Q12948 553 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 ANO5Q75V66 913 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 MIER3Q7Z3K6 550 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 PIK3R5Q8WYR1 880 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 SMARCE1Q969G3 411 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 TMEM121BQ9BXQ6 578 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-202ENST00000595242 TMEM60Q9H2L4 133 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 ZFP14Q9HCL3 533 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 ZNF334Q9HCZ1 680 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-202ENST00000595242 DACH1Q9UI36 760 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 GIT1Q9Y2X7 761 aa14.03□□□□□ -0.16
SCAF1-202ENST00000595242 BIN1O00499 593 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PAPSS2O95340 614 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-202ENST00000595242 SMC2O95347 1197 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PTMAP06454 111 aaKnown RBP14.02□□□□□ -0.17
SCAF1-202ENST00000595242 RHOP08100 348 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 OR52Z1P0C646 297 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 SPINK2P20155 84 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 BMP6P22004 513 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 FCARP24071 287 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 CCNE1P24864 410 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TXLNAP40222 546 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TPM4P67936 248 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 DPYDQ12882 1025 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 NOTUMQ6P988 496 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 DTHD1Q6ZMT9 781 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 MAP4K3Q8IVH8 894 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PDILTQ8N807 584 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 RDM1Q8NG50 284 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TBCKQ8TEA7 893 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 HASPINQ8TF76 798 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TMEM143Q96AN5 459 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 DHX58Q96C10 678 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 GSDMAQ96QA5 445 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 NAP1L4Q99733 375 aaKnown RBP14.02□□□□□ -0.17
SCAF1-202ENST00000595242 PAAF1Q9BRP4 392 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 ADAM33Q9BZ11 813 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 TRPV5Q9NQA5 729 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 WASF3Q9UPY6 502 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 LAMA5O15230 3695 aa14.02□□□□□ -0.17
SCAF1-202ENST00000595242 ITPR1Q14643 2758 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 FLNBO75369 2602 aaKnown RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 PCNX2A6NKB5 2137 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 GIPC1O14908 333 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 EDIL3O43854 480 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 NEMFO60524 1076 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 TSPAN1O60635 241 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 CEBPBP17676 345 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 AKAP5P24588 427 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 GDI1P31150 447 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 OR1D2P34982 312 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 NOVA1P51513 510 aaKnown RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 MYL5Q02045 173 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 LAMTOR4Q0VGL1 99 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 GRIK3Q13003 919 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 RAB33AQ14088 237 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 FAM78AQ5JUQ0 283 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 PPP4R3AQ6IN85 833 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 PSPC1Q8WXF1 523 aaKnown RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 SLC7A3Q8WY07 619 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 CPB2Q96IY4 423 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 LOXL4Q96JB6 756 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 TRIM6Q9C030 488 aaPredicted RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 NXF3Q9H4D5 531 aaKnown RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 MAGEF1Q9HAY2 307 aa14.01□□□□□ -0.17
SCAF1-202ENST00000595242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 SMG1Q96Q15 3661 aaKnown RBP14.01□□□□□ -0.17
SCAF1-202ENST00000595242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 NRG2O14511 850 aaPredicted RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 PSMD10O75832 226 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 EPN2O95208 641 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 MYL1P05976 194 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 GCFC2P16383 781 aaKnown RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 PTPN2P17706 415 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 PSMC3P17980 439 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 ERCC5P28715 1186 aaPredicted RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 AXLP30530 894 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 HOXC13P31276 330 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 PLCB2Q00722 1185 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 NCBP1Q09161 790 aaKnown RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 LRRC32Q14392 662 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 PLA2G2CQ5R387 149 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 RNF43Q68DV7 783 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 PDXDC1Q6P996 788 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 MOXD1Q6UVY6 613 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 RTL10Q7L3V2 364 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 HACE1Q8IYU2 909 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 IGSF22Q8N9C0 903 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms