RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TLE2Q04725 743 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 GPNMBQ14956 572 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 TRIM60Q495X7 471 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 SCARA5Q6ZMJ2 495 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 NOP9Q86U38 636 aaKnown RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 SLC30A5Q8TAD4 765 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 TOX2Q96NM4 488 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 AGPAT1Q99943 283 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 NENFQ9UMX5 172 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 TFR2Q9UP52 801 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 GIT1Q9Y2X7 761 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 PPEF2O14830 753 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 CYP11B1P15538 503 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 MLH1P40692 756 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 FAAP100Q0VG06 881 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 RTN4RL1Q86UN2 441 aaPredicted RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 GSTCDQ8NEC7 633 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 LINC01599Q8WXQ3 324 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 PPP1R10Q96QC0 940 aaKnown RBP16.26■□□□□ 0.19
VRK3-207ENST00000594092 GAD1Q99259 594 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 LACRTQ9GZZ8 138 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 RGS18Q9NS28 235 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 NAGPAQ9UK23 515 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 GUCA1BQ9UMX6 200 aa16.26■□□□□ 0.19
VRK3-207ENST00000594092 ANO9A1A5B4 782 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 WEE2P0C1S8 567 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 SKIP12755 728 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 CHRNB2P17787 502 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 CYP3A5P20815 502 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 PDE6CP51160 858 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 C9orf57Q5W0N0 161 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 ALKBH5Q6P6C2 394 aaKnown RBP16.25■□□□□ 0.19
VRK3-207ENST00000594092 TMEM270Q6UE05 265 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 ECHDC2Q86YB7 292 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 IRX2Q9BZI1 471 aaPredicted RBP16.25■□□□□ 0.19
VRK3-207ENST00000594092 CISHQ9NSE2 258 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 TRIM10Q9UDY6 481 aa16.25■□□□□ 0.19
VRK3-207ENST00000594092 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
VRK3-207ENST00000594092 SCN1AP35498 2009 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 ARL5CA6NH57 179 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 C9IYK1 514 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 CALCAP01258 141 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 CD58P19256 250 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 AFF1P51825 1210 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 ZNF132P52740 706 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 BPIFB4P59827 614 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 NAB2Q15742 525 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 ZNF569Q5MCW4 686 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 ZNF598Q86UK7 904 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 RPUSD2Q8IZ73 545 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 LRRC52Q8N7C0 313 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 RBBP8NLQ8NC74 664 aaPredicted RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 DDX1Q92499 740 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 PAWRQ96IZ0 340 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 WDR24Q96S15 920 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 RPS6KC1Q96S38 1066 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 SDCBP2Q9H190 292 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 GOLGA2P5Q9HBQ8 144 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 MIOSQ9NXC5 875 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 PIRO00625 290 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 P4HA1P13674 534 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 RAP1GAPP47736 663 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 YWHAEP62258 255 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 FMO1Q01740 532 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 CDR2Q01850 454 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 PLEKHG4Q58EX7 1191 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 SMYD5Q6GMV2 418 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 PALB2Q86YC2 1186 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 RSAD1Q9HA92 442 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 SEPT11Q9NVA2 429 aaKnown RBP16.24■□□□□ 0.19
VRK3-207ENST00000594092 ATP11BQ9Y2G3 1177 aa16.24■□□□□ 0.19
VRK3-207ENST00000594092 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
VRK3-207ENST00000594092 PJA2O43164 708 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 THP07101 528 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 MMEP08473 750 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 LRPAP1P30533 357 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 SCNN1GP51170 649 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 CDH8P55286 799 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 FAM189BP81408 668 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 SLC24A5Q71RS6 500 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 DBF4BQ8NFT6 615 aa16.23■□□□□ 0.19
VRK3-207ENST00000594092 SCLYQ96I15 445 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms