RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TRIM10Q9UDY6 481 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 POLIQ9UNA4 740 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 GIT1Q9Y2X7 761 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 PCDHB4Q9Y5E5 795 aa22.28■■□□□ 1.16
PNKP-203ENST00000593946 ANO9A1A5B4 782 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 PJA2O43164 708 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 TUBB4AP04350 444 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 CYP3A5P20815 502 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 ZNF132P52740 706 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 TMEM270Q6UE05 265 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 DIS3LQ8TF46 1054 aaKnown RBP22.27■■□□□ 1.16
PNKP-203ENST00000593946 DDX1Q92499 740 aaKnown RBP22.27■■□□□ 1.16
PNKP-203ENST00000593946 LPPQ93052 612 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 TOX2Q96NM4 488 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 PPP1R10Q96QC0 940 aaKnown RBP22.27■■□□□ 1.16
PNKP-203ENST00000593946 CISHQ9NSE2 258 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 ATP8B3O60423 1300 aa22.27■■□□□ 1.16
PNKP-203ENST00000593946 KRT86O43790 486 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 SKIP12755 728 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 CHRNB2P17787 502 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 TNFAIP3P21580 790 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 BPIFB4P59827 614 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 ETF1P62495 437 aaKnown RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 DNTTIP2Q5QJE6 756 aaKnown RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 CCDC122Q5T0U0 273 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 C9orf57Q5W0N0 161 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 SCARA5Q6ZMJ2 495 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 TXLNBQ8N3L3 684 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 RBBP8NLQ8NC74 664 aaPredicted RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 GSTCDQ8NEC7 633 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 TSGA10Q9BZW7 698 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 PPEF2O14830 753 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 WEE2P0C1S8 567 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 P4HA1P13674 534 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 MLH1P40692 756 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 YWHAEP62258 255 aaKnown RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 CDR2Q01850 454 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 SOX4Q06945 474 aaPredicted RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 KIF5AQ12840 1032 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 MYO1EQ12965 1108 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 GPNMBQ14956 572 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 RPUSD2Q8IZ73 545 aaKnown RBP22.26■■□□□ 1.15
PNKP-203ENST00000593946 GAD1Q99259 594 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 RGS18Q9NS28 235 aa22.26■■□□□ 1.15
PNKP-203ENST00000593946 DCDC2CA8MYV0 355 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 PIRO00625 290 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 NBNO60934 754 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 FMO1Q01740 532 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 FAAP100Q0VG06 881 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 ECHDC2Q86YB7 292 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 PALB2Q86YC2 1186 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 LINC01599Q8WXQ3 324 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 IRX2Q9BZI1 471 aaPredicted RBP22.25■■□□□ 1.15
PNKP-203ENST00000593946 CYP3A43Q9HB55 503 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 GUCA1BQ9UMX6 200 aa22.25■■□□□ 1.15
PNKP-203ENST00000593946 ARL5CA6NH57 179 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 C9IYK1 514 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 MMEP08473 750 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 CD58P19256 250 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 TAF3Q5VWG9 929 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 ZNF598Q86UK7 904 aaKnown RBP22.24■■□□□ 1.15
PNKP-203ENST00000593946 RTN4RL1Q86UN2 441 aaPredicted RBP22.24■■□□□ 1.15
PNKP-203ENST00000593946 ZNF677Q86XU0 584 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 PGBD4Q96DM1 585 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 RPS6KC1Q96S38 1066 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 FTHL17Q9BXU8 183 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 PACSIN1Q9BY11 444 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 SDCBP2Q9H190 292 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 FAM124BQ9H5Z6 455 aaPredicted RBP22.24■■□□□ 1.15
PNKP-203ENST00000593946 SMYD3Q9H7B4 428 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 SLC38A7Q9NVC3 462 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 DUSP10Q9Y6W6 482 aa22.24■■□□□ 1.15
PNKP-203ENST00000593946 KIF5CO60282 957 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 LRPAP1P30533 357 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 TLE2Q04725 743 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 PLEKHG4Q58EX7 1191 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 TSPYL2Q9H2G4 693 aaPredicted RBP22.23■■□□□ 1.15
PNKP-203ENST00000593946 RSAD1Q9HA92 442 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 GOLGA2P5Q9HBQ8 144 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 SEPT11Q9NVA2 429 aaKnown RBP22.23■■□□□ 1.15
PNKP-203ENST00000593946 MYO1AQ9UBC5 1043 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 CALCAP01258 141 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 RAP1GAPP47736 663 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 AFF1P51825 1210 aaKnown RBP22.23■■□□□ 1.15
PNKP-203ENST00000593946 GNG11P61952 73 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 TNNC1P63316 161 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 SYT10Q6XYQ8 523 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 SLC24A5Q71RS6 500 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 PCDHB18PQ96TA0 734 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 HIPK3Q9H422 1215 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 UBN1Q9NPG3 1134 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 INTUQ9ULD6 942 aa22.23■■□□□ 1.15
PNKP-203ENST00000593946 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.23■■□□□ 1.15
PNKP-203ENST00000593946 THP07101 528 aa22.22■■□□□ 1.15
PNKP-203ENST00000593946 GNA15P30679 374 aa22.22■■□□□ 1.15
PNKP-203ENST00000593946 CDH8P55286 799 aa22.22■■□□□ 1.15
PNKP-203ENST00000593946 FAM189BP81408 668 aa22.22■■□□□ 1.15
PNKP-203ENST00000593946 FAM43BQ6ZT52 329 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms