RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GTF2BQ00403 316 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 LMNB2Q03252 620 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CEBPZQ03701 1054 aaKnown RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 PRKCQQ04759 706 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 SNW1Q13573 536 aaKnown RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 LIN9Q5TKA1 542 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 PARM1Q6UWI2 310 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 RSPO2Q6UXX9 243 aaPredicted RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 MAP4K3Q8IVH8 894 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 ATRIPQ8WXE1 791 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 SNX21Q969T3 373 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 RTKNQ9BST9 563 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 SPATA6Q9NWH7 488 aaPredicted RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CDV3Q9UKY7 258 aaKnown RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 SMG5Q9UPR3 1016 aaKnown RBP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CDY1Q9Y6F8 540 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 SYN3O14994 580 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ZZEF1O43149 2961 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 C8AP07357 584 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ADRB1P08588 477 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 NMT1P30419 496 aaKnown RBP14.37□□□□□ -0.11
H3F3B-213ENST00000593254 TNFSF9P41273 254 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 MAGEA9P43362 315 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 CSTF1Q05048 431 aaKnown RBP14.37□□□□□ -0.11
H3F3B-213ENST00000593254 SLC39A14Q15043 492 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 MLF2Q15773 248 aaPredicted RBP14.37□□□□□ -0.11
H3F3B-213ENST00000593254 KYAT1Q16773 422 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ST3GAL2Q16842 350 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 SLC8B1Q6J4K2 584 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 KRI1Q8N9T8 703 aaKnown RBP14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ST6GALNAC4Q9H4F1 302 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ZHX3Q9H4I2 956 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 ZSCAN32Q9NX65 697 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 CDH7Q9ULB5 785 aa14.37□□□□□ -0.11
H3F3B-213ENST00000593254 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
H3F3B-213ENST00000593254 A0A0B4J269 797 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 DCDC2BA2VCK2 349 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 OGTO15294 1046 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 TBC1D4O60343 1298 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 ADRB2P07550 413 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 POU2F2P09086 479 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 FSHRP23945 695 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 TXLNAP40222 546 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 NASPP49321 788 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-213ENST00000593254 MRPL58Q14197 206 aaKnown RBP14.36□□□□□ -0.11
H3F3B-213ENST00000593254 ZBTB6Q15916 424 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
H3F3B-213ENST00000593254 UVSSAQ2YD98 709 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SLC44A4Q53GD3 710 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 PPM1LQ5SGD2 360 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 ZBTB41Q5SVQ8 909 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 AXDND1Q5T1B0 1012 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-213ENST00000593254 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SLC39A4Q6P5W5 647 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 RTL10Q7L3V2 364 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SLC7A14Q8TBB6 771 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
H3F3B-213ENST00000593254 CLDN23Q96B33 292 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SUSD3Q96L08 255 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 NUB1Q9Y5A7 615 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 SCN1AP35498 2009 aa14.36□□□□□ -0.11
H3F3B-213ENST00000593254 FAM170BA6NMN3 283 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
H3F3B-213ENST00000593254 CYP3A5P20815 502 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 LRPAP1P30533 357 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 ROR1Q01973 937 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 PPP2R3AQ06190 1150 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 UBXN2BQ14CS0 331 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 ZC2HC1CQ53FD0 456 aaPredicted RBP14.35□□□□□ -0.11
H3F3B-213ENST00000593254 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 SFR1Q86XK3 245 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 DDX12PQ92771 950 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 DNAJC19Q96DA6 116 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 TSPAN18Q96SJ8 248 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 MSTO1Q9BUK6 570 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 PARD6AQ9NPB6 346 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 LTB4R2Q9NPC1 389 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 PRMT8Q9NR22 394 aaPredicted RBP14.35□□□□□ -0.11
H3F3B-213ENST00000593254 SEL1LQ9UBV2 794 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 UBQLN1Q9UMX0 589 aaKnown RBP14.35□□□□□ -0.11
H3F3B-213ENST00000593254 WDFY3Q8IZQ1 3526 aa14.35□□□□□ -0.11
H3F3B-213ENST00000593254 A0A087X0B3 334 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 WDR27A2RRH5 827 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 MYMKA6NI61 221 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 CCL16O15467 120 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 XYLBO75191 536 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 PPP1R37O75864 691 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 ABLIM3O94929 683 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 MCM4P33991 863 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
H3F3B-213ENST00000593254 SPAG1Q07617 926 aa14.34□□□□□ -0.11
H3F3B-213ENST00000593254 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms