RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 KCTD19Q17RG1 926 aaPredicted RBP20.98■□□□□ 0.95
CLIP3-206ENST00000593074 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 ZNF568Q3ZCX4 644 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 LIN9Q5TKA1 542 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 NFS1Q9Y697 457 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 ANK1P16157 1881 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 INO80B-WBP1J3KQ70 363 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 MYO1FO00160 1098 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 B4GALT5O43286 388 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 B4GALT4O60513 344 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 PPFIA4O75335 1185 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 MYL6P60660 151 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 SGSM1Q2NKQ1 1148 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 LEKR1Q6ZMV7 388 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 PASD1Q8IV76 773 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 MAML3Q96JK9 1138 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 FMO2Q99518 471 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 C11orf70Q9BRQ4 267 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 TRIM31Q9BZY9 425 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 INO80BQ9C086 356 aaPredicted RBP20.98■□□□□ 0.95
CLIP3-206ENST00000593074 ADAM22Q9P0K1 906 aa20.98■□□□□ 0.95
CLIP3-206ENST00000593074 PODXLO00592 558 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 FSCN2O14926 492 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 MAGEB2O15479 319 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 PROSCO94903 275 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 FNTAP49354 379 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 ZSCAN26Q16670 478 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 C2CD6Q53TS8 623 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 SPDYCQ5MJ68 293 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 PLEKHA7Q6IQ23 1121 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 LLGL2Q6P1M3 1020 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 CCDC137Q6PK04 289 aaKnown RBP20.97■□□□□ 0.95
CLIP3-206ENST00000593074 ZBTB10Q96DT7 871 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 ZNF668Q96K58 619 aaPredicted RBP20.97■□□□□ 0.95
CLIP3-206ENST00000593074 TXLNGYQ9BZA5 131 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 MINDY3Q9H8M7 445 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 RARAP10276 462 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 POU5F1BQ06416 359 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 MAMLD1Q13495 774 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 ZNF606Q8WXB4 792 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 FAM212AQ96EL1 285 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 MRPL47Q9HD33 250 aaKnown RBP20.97■□□□□ 0.95
CLIP3-206ENST00000593074 TNFSF13BQ9Y275 285 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 SCINQ9Y6U3 715 aa20.97■□□□□ 0.95
CLIP3-206ENST00000593074 PPFIA2O75334 1257 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 COILP38432 576 aaPredicted RBP20.96■□□□□ 0.95
CLIP3-206ENST00000593074 TMEM132AQ24JP5 1023 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 EEF1DP3Q658K8 133 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 LINC01465Q8N7H1 131 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 XYLT2Q9H1B5 865 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 CDT1Q9H211 546 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 LRRC19Q9H756 370 aa20.96■□□□□ 0.95
CLIP3-206ENST00000593074 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 LSM8O95777 96 aaKnown RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 TMEM191BP0C7N4 346 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 GBP1P32455 592 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 SKOR1P84550 965 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 TFAMQ00059 246 aaKnown RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 FAM187BQ17R55 369 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 MMS22LQ6ZRQ5 1243 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 PHLDB2Q86SQ0 1253 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 THNSL1Q8IYQ7 743 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 DDX27Q96GQ7 796 aaKnown RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 ABHD16BQ9H3Z7 469 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 IFT122Q9HBG6 1241 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 CISHQ9NSE2 258 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 GRHL1Q9NZI5 618 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 MMP8P22894 467 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 HNRNPH2P55795 449 aaKnown RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 DHX9Q08211 1270 aaKnown RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 TRPC3Q13507 836 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 EMC10Q5UCC4 262 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 ZDHHC24Q6UX98 284 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 IFNLR1Q8IU57 520 aaPredicted RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 SLCO2A1Q92959 643 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 ATP6V1G3Q96LB4 118 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 C16orf70Q9BSU1 422 aa20.95■□□□□ 0.94
CLIP3-206ENST00000593074 PRMT7Q9NVM4 692 aaPredicted RBP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.95■□□□□ 0.94
CLIP3-206ENST00000593074 SLC15A5A6NIM6 579 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 HMGB1P1B2RPK0 211 aaPredicted RBP20.94■□□□□ 0.94
CLIP3-206ENST00000593074 PSTPIP1O43586 416 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 IL18RAPO95256 599 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 ZNF286BP0CG31 522 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 SSTR3P32745 418 aaPredicted RBP20.94■□□□□ 0.94
CLIP3-206ENST00000593074 ASPAP45381 313 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 PHKA2P46019 1235 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 ACVR2BQ13705 512 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 ZNF699Q32M78 642 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 DUSP28Q4G0W2 176 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 CEP85LQ5SZL2 805 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 CST9Q5W186 159 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 SH2D3CQ8N5H7 860 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 CEP120Q8N960 986 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 ANKRD36BP1Q96IX9 119 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 TMBIM4Q9HC24 238 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 SLC5A4Q9NY91 659 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 CALCOCO1Q9P1Z2 691 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms