RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 GLYCTKQ8IVS8 523 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 GOLGA5Q8TBA6 731 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 PARD3BQ8TEW8 1205 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 SUSD6Q92537 303 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 NECAB3Q96P71 396 aaPredicted RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
H3F3B-212ENST00000592643 APOL5Q9BWW9 433 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 RMND1Q9NWS8 449 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
H3F3B-212ENST00000592643 SYN3O14994 580 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 MBTPS2O43462 519 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 OAZ2O95190 189 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 VNN1O95497 513 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
H3F3B-212ENST00000592643 NR2F2P24468 414 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 KLRC2P26717 231 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 MCM4P33991 863 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 SLC8B1Q6J4K2 584 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 ELMO3Q96BJ8 720 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 SENP8Q96LD8 212 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 TMEM209Q96SK2 561 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 EMILIN2Q9BXX0 1053 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 CD320Q9NPF0 282 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 CD207Q9UJ71 328 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 AGAP1Q9UPQ3 857 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
H3F3B-212ENST00000592643 SCN1AP35498 2009 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TRAPPC3O43617 180 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 LRRN2O75325 713 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 RFPL2O75678 378 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 C4BPAP04003 597 aaKnown RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 CYP11A1P05108 521 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 OR1D2P34982 312 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 RAB33AQ14088 237 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TJAP1Q5JTD0 557 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TDRD10Q5VZ19 366 aaKnown RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 CSGALNACT2Q8N6G5 542 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 CASP10Q92851 521 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 XYLT2Q9H1B5 865 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 FBXW11Q9UKB1 542 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 USP15Q9Y4E8 981 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-212ENST00000592643 TRIOO75962 3097 aa12.79□□□□□ -0.36
H3F3B-212ENST00000592643 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 HCRTO43612 131 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 CALUO43852 315 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-212ENST00000592643 ABLIM3O94929 683 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 GLUD1P00367 558 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 ADH1AP07327 375 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 TYMPP19971 482 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 TAF6P49848 677 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 ROR1Q01973 937 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 PPP3CAQ08209 521 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 ADAM9Q13443 819 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 SMAD4Q13485 552 aaKnown RBP12.78□□□□□ -0.36
H3F3B-212ENST00000592643 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
H3F3B-212ENST00000592643 CCDC142Q17RM4 750 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 ANKS3Q6ZW76 656 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 CCDC34Q96HJ3 373 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 NCOR1O75376 2440 aa12.78□□□□□ -0.36
H3F3B-212ENST00000592643 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-212ENST00000592643 CYB561D2O14569 222 aa12.77□□□□□ -0.37
H3F3B-212ENST00000592643 MAPK13O15264 365 aa12.77□□□□□ -0.37
H3F3B-212ENST00000592643 SEC24AO95486 1093 aa12.77□□□□□ -0.37
H3F3B-212ENST00000592643 C1RP00736 705 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms