RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CCDC33Q8N5R6 958 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 ATP11CQ8NB49 1132 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 TRIM43Q96BQ3 446 aaPredicted RBP7.6□□□□□ -1.19
VMP1-215ENST00000592619 TMEM41AQ96HV5 264 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 PPP1R16BQ96T49 567 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 MYOCQ99972 504 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 SMURF2Q9HAU4 748 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 CD320Q9NPF0 282 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 TERF2IPQ9NYB0 399 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 NCDNQ9UBB6 729 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 EEA1Q15075 1411 aa7.6□□□□□ -1.19
VMP1-215ENST00000592619 A0A1B0GTL3 188 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 MROH6A6NGR9 719 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 B5MCH6 92 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 BTN3A1O00481 513 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 ADAMTS3O15072 1205 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 TBC1D4O60343 1298 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 ABHD16AO95870 558 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
VMP1-215ENST00000592619 RALBP1Q15311 655 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 TUBB8Q3ZCM7 444 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 LIX1LQ8IVB5 337 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 KBTBD2Q8IY47 623 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 ADGRG2Q8IZP9 1017 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 CNPY4Q8N129 248 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 LINC01356Q8N9X3 169 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 ATXN2LQ8WWM7 1075 aaKnown RBP7.59□□□□□ -1.19
VMP1-215ENST00000592619 MAML1Q92585 1016 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 PACSIN1Q9BY11 444 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 BRD9Q9H8M2 597 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 SERHLQ9NQF3 203 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.59□□□□□ -1.19
VMP1-215ENST00000592619 SACM1LQ9NTJ5 587 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 JKAMPQ9P055 326 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 MYO1AQ9UBC5 1043 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 CDC23Q9UJX2 597 aa7.59□□□□□ -1.19
VMP1-215ENST00000592619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.59□□□□□ -1.19
VMP1-215ENST00000592619 MORC2Q9Y6X9 1032 aaPredicted RBP7.59□□□□□ -1.19
VMP1-215ENST00000592619 RUSC2Q8N2Y8 1516 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 A0A087WV62 115 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 UBE2QL1A1L167 161 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 MATN2O00339 956 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 HOXA3O43365 443 aaPredicted RBP7.58□□□□□ -1.2
VMP1-215ENST00000592619 AMHP03971 560 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 ANXA1P04083 346 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 GJB1P08034 283 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 RARBP10826 455 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 PAX3P23760 479 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 TECP42680 631 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 KCNJ5P48544 419 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 CLRN1P58418 232 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 PMS2P11Q13670 270 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 TRIM14Q14142 442 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 C3orf38Q5JPI3 329 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 SMAP1Q8IYB5 467 aaPredicted RBP7.58□□□□□ -1.2
VMP1-215ENST00000592619 GIMAP8Q8ND71 665 aaPredicted RBP7.58□□□□□ -1.2
VMP1-215ENST00000592619 BHLHE22Q8NFJ8 381 aaPredicted RBP7.58□□□□□ -1.2
VMP1-215ENST00000592619 SLC35B2Q8TB61 432 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.58□□□□□ -1.2
VMP1-215ENST00000592619 ZNF518BQ9C0D4 1074 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 LUZP4Q9P127 313 aa7.58□□□□□ -1.2
VMP1-215ENST00000592619 SHROOM2Q13796 1616 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 hCG_1642624A0A1W2PR95 340 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
VMP1-215ENST00000592619 ALAS1P13196 640 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 SLC6A4P31645 630 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 HSPA7P48741 367 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 AFF3P51826 1226 aaKnown RBP7.57□□□□□ -1.2
VMP1-215ENST00000592619 RPS16P62249 146 aaKnown RBP7.57□□□□□ -1.2
VMP1-215ENST00000592619 NOMO3P69849 1222 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 SLC13A2Q13183 592 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 RIN1Q13671 783 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 SLC44A4Q53GD3 710 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 KLHDC7AQ5VTJ3 777 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 ZNF529Q6P280 563 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 ZNF365Q70YC5 407 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 FAM124AQ86V42 546 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 MICU3Q86XE3 530 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 SYTL1Q8IYJ3 562 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 TP53I13Q8NBR0 393 aaPredicted RBP7.57□□□□□ -1.2
VMP1-215ENST00000592619 TCF25Q9BQ70 676 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 TTLL2Q9BWV7 592 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 GPR35Q9HC97 309 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 PCDHGB2Q9Y5G2 931 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 CARMIL1Q5VZK9 1371 aa7.57□□□□□ -1.2
VMP1-215ENST00000592619 RIMBP3CA6NJZ7 1639 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 RIMBP3BA6NNM3 1639 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 RIMBP3Q9UFD9 1639 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 RAPGEF2Q9Y4G8 1499 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 PNPLA7Q6ZV29 1317 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 TCRBV7S2A1N4TA0A589 114 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 TBKBP1A7MCY6 615 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 KIAA0391O15091 583 aaKnown RBP7.56□□□□□ -1.2
VMP1-215ENST00000592619 PLA2G6O60733 806 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 ANXA2P07355 339 aaKnown RBP7.56□□□□□ -1.2
VMP1-215ENST00000592619 FGFR2P21802 821 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 MAPK10P53779 464 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms