RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 ENPEPQ07075 957 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 DCAF17Q5H9S7 520 aaPredicted RBP22.38■■□□□ 1.17
DNMT1-227ENST00000592342 RTP2Q5QGT7 225 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 KIAA0319Q5VV43 1072 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 LRRC52Q8N7C0 313 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 APPL2Q8NEU8 664 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.38■■□□□ 1.17
DNMT1-227ENST00000592342 PCDHB8Q9UN66 801 aa22.38■■□□□ 1.17
DNMT1-227ENST00000592342 KPNA7A9QM74 516 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 PER2O15055 1255 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 PSMD5Q16401 504 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 PRSS55Q6UWB4 352 aaPredicted RBP22.37■■□□□ 1.17
DNMT1-227ENST00000592342 CREBRFQ8IUR6 639 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 GPR65Q8IYL9 337 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 SENP8Q96LD8 212 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 SIX4Q9UIU6 781 aa22.37■■□□□ 1.17
DNMT1-227ENST00000592342 M0QZQ0 153 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 SPTLC1O15269 473 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 ODC1P11926 461 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 KLRC2P26717 231 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 GCLMP48507 274 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 AARSP49588 968 aaKnown RBP eCLIP22.36■■□□□ 1.17
DNMT1-227ENST00000592342 EP400NLQ6ZTU2 488 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 ANKS3Q6ZW76 656 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 FRMD5Q7Z6J6 570 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 PIK3R5Q8WYR1 880 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 BORCS6Q96GS4 357 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 HPDLQ96IR7 371 aa22.36■■□□□ 1.17
DNMT1-227ENST00000592342 CDCA3Q99618 268 aaPredicted RBP22.36■■□□□ 1.17
DNMT1-227ENST00000592342 FSD2A1L4K1 749 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 H7C4K7 107 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 CYB561D2O14569 222 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 NCK2O43639 380 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 C4BPAP04003 597 aaKnown RBP22.35■■□□□ 1.17
DNMT1-227ENST00000592342 ADH1AP07327 375 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 TYRO3Q06418 890 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 TDRD10Q5VZ19 366 aaKnown RBP22.35■■□□□ 1.17
DNMT1-227ENST00000592342 SV2AQ7L0J3 742 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 METTL23Q86XA0 190 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 CXorf38Q8TB03 319 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 LNX1Q8TBB1 728 aaPredicted RBP22.35■■□□□ 1.17
DNMT1-227ENST00000592342 KLHL5Q96PQ7 755 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 CHD7Q9P2D1 2997 aa22.35■■□□□ 1.17
DNMT1-227ENST00000592342 TIMM13Q9Y5L4 95 aaPredicted RBP22.35■■□□□ 1.17
DNMT1-227ENST00000592342 HUS1O60921 280 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 LILRB3O75022 631 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 CST3P01034 146 aaPredicted RBP22.34■■□□□ 1.17
DNMT1-227ENST00000592342 CNPP09543 421 aaKnown RBP22.34■■□□□ 1.17
DNMT1-227ENST00000592342 GTF2H1P32780 548 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 PIK3CAP42336 1068 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 YWHAHQ04917 246 aaPredicted RBP22.34■■□□□ 1.17
DNMT1-227ENST00000592342 PPP3CAQ08209 521 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 HYAL1Q12794 435 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 NCOA4Q13772 614 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 DUSP6Q16828 381 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 ZACNQ401N2 412 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 VARS2Q5ST30 1063 aaKnown RBP22.34■■□□□ 1.17
DNMT1-227ENST00000592342 C1orf220Q5T0J3 134 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 ZNF280DQ6N043 979 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 PPFIBP1Q86W92 1011 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 GLYCTKQ8IVS8 523 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 RXFP1Q9HBX9 757 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 TMEM8AQ9HCN3 771 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 FNIP2Q9P278 1114 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 DSEQ9UL01 958 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 SNX9Q9Y5X1 595 aa22.34■■□□□ 1.17
DNMT1-227ENST00000592342 PRRC2BQ5JSZ5 2229 aaKnown RBP22.34■■□□□ 1.17
DNMT1-227ENST00000592342 SYCE3A1L190 88 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 TEX28O15482 410 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 CLASP2O75122 1294 aaKnown RBP22.33■■□□□ 1.17
DNMT1-227ENST00000592342 SRGAP2BP0DMP2 458 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 RPL17P18621 184 aaKnown RBP22.33■■□□□ 1.17
DNMT1-227ENST00000592342 TYMPP19971 482 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 ATICP31939 592 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 GTF2F1P35269 517 aaKnown RBP eCLIP22.33■■□□□ 1.17
DNMT1-227ENST00000592342 NDUFV1P49821 464 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 MXI1P50539 228 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 MYL6P60660 151 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 CTXN3Q4LDR2 81 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 KRT39Q6A163 491 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 SCARA3Q6AZY7 606 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 FAM114A1Q8IWE2 563 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 MED15Q96RN5 788 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 IMPG2Q9BZV3 1241 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 NAT10Q9H0A0 1025 aaKnown RBP22.33■■□□□ 1.17
DNMT1-227ENST00000592342 DNAJC25Q9H1X3 360 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 CLDND1Q9NY35 253 aa22.33■■□□□ 1.17
DNMT1-227ENST00000592342 MAGEC2Q9UBF1 373 aaPredicted RBP22.33■■□□□ 1.17
DNMT1-227ENST00000592342 SZT2Q5T011 3432 aa22.33■■□□□ 1.16
DNMT1-227ENST00000592342 TNNC1P63316 161 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 ZNF699Q32M78 642 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 OVOS1Q6IE37 1185 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 LLGL2Q6P1M3 1020 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 C11orf57Q6ZUT1 292 aaPredicted RBP22.32■■□□□ 1.16
DNMT1-227ENST00000592342 EFHBQ8N7U6 833 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 CCDC150Q8NCX0 1101 aa22.32■■□□□ 1.16
DNMT1-227ENST00000592342 CNOT6LQ96LI5 555 aaKnown RBP22.32■■□□□ 1.16
DNMT1-227ENST00000592342 MMS19Q96T76 1030 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms