RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TRAPPC10P48553 1259 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 GPC5P78333 572 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 GUCY1B3Q02153 619 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 PPP2R5DQ14738 602 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 MLF2Q15773 248 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-226ENST00000591534 SLC44A4Q53GD3 710 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 ATF7IP2Q5U623 682 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 PARM1Q6UWI2 310 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 NOSTRINQ8IVI9 506 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 C8orf76Q96K31 380 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 PAAF1Q9BRP4 392 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-226ENST00000591534 SPATA6Q9NWH7 488 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-226ENST00000591534 MTRRQ9UBK8 725 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 FBXO4Q9UKT5 387 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
BRCA1-226ENST00000591534 GDAQ9Y2T3 454 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 MRPS23Q9Y3D9 190 aaKnown RBP10.34□□□□□ -0.75
BRCA1-226ENST00000591534 R4GN57 208 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 DMDP11532 3685 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 A0A087WWV3 80 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 FAM170BA6NMN3 283 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PRRG1O14668 218 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 MED24O75448 989 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 ECI2O75521 394 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 DKK1O94907 266 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PTPN2P17706 415 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 CCT6AP40227 531 aaKnown RBP10.33□□□□□ -0.76
BRCA1-226ENST00000591534 SCTRP47872 440 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 NUCB2P80303 420 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 SNW1Q13573 536 aaKnown RBP10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PDIA5Q14554 519 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PUM1Q14671 1186 aaKnown RBP eCLIP10.33□□□□□ -0.76
BRCA1-226ENST00000591534 UBXN2BQ14CS0 331 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF852Q6ZMS4 543 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 ELMOD1Q8N336 334 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 FGF14Q92915 247 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 LLPHQ9BRT6 129 aaKnown RBP10.33□□□□□ -0.76
BRCA1-226ENST00000591534 CCDC113Q9H0I3 377 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 TMPRSS4Q9NRS4 437 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 DLGAP2Q9P1A6 1054 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 LRWD1Q9UFC0 647 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 MAFFQ9ULX9 164 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PCDHGA2Q9Y5H1 932 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 PCDHGA11Q9Y5H2 935 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-226ENST00000591534 CDY1Q9Y6F8 540 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 DENND4AQ7Z401 1863 aa10.33□□□□□ -0.76
BRCA1-226ENST00000591534 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 CCDC169A6NNP5 214 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 MAN2B1O00754 1011 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 SIAH2O43255 324 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 MICAL2O94851 1124 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 PTMSP20962 102 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 RPL9P32969 192 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 SLC19A1P41440 591 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 GRM5P41594 1212 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 CLCNKBP51801 687 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 NTHL1P78549 312 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 HMGN5P82970 282 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 USP4Q13107 963 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF174Q15697 407 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 NAB2Q15742 525 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 UPP1Q16831 310 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 IQCEQ6IPM2 695 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 DGLUCYQ7Z3D6 616 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 FAM184AQ8NB25 1140 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF461Q8TAF7 563 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 PPP1R10Q96QC0 940 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 TCHPQ9BT92 498 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 MRPL4Q9BYD3 311 aaKnown RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 FAM126AQ9BYI3 521 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 FOXQ1Q9C009 403 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 BHMT2Q9H2M3 363 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 C17orf75Q9HAS0 396 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 AVENQ9NQS1 362 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-226ENST00000591534 CACNG4Q9UBN1 327 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 ATP6V1DQ9Y5K8 247 aa10.32□□□□□ -0.76
BRCA1-226ENST00000591534 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 ARHGEF37A1IGU5 675 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 SFI1A8K8P3 1242 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 LAD1O00515 517 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 SYN3O14994 580 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 RHOP08100 348 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 NRLP54845 237 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 STRN3Q13033 797 aa10.31□□□□□ -0.76
BRCA1-226ENST00000591534 ZNF568Q3ZCX4 644 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms