RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 FAM189A1O60320 539 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 MOSPD3O75425 235 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 PIGRP01833 764 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 OR4Q2P0C623 313 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 SCP2P22307 547 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 TARSP26639 723 aaKnown RBP23.66■■□□□ 1.38
DDX39A-215ENST00000590696 MAGEA9P43362 315 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 AARSP49588 968 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■■■■■ 30.9
DDX39A-215ENST00000590696 ZNF131P52739 623 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 GRIN1Q05586 938 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 DSTYKQ6XUX3 929 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 USP37Q86T82 979 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 BEST2Q8NFU1 509 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 DNASE1L2Q92874 299 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 ZSWIM3Q96MP5 696 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 ASB16Q96NS5 453 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 BRD9Q9H8M2 597 aa23.66■■□□□ 1.38
DDX39A-215ENST00000590696 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
DDX39A-215ENST00000590696 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.66■■□□□ 1.38
DDX39A-215ENST00000590696 KRT18P05783 430 aaKnown RBP23.65■■□□□ 1.38
DDX39A-215ENST00000590696 GJA1P17302 382 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 PLCG1P19174 1290 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 LONP1P36776 959 aaKnown RBP23.65■■□□□ 1.38
DDX39A-215ENST00000590696 ID4P47928 161 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 KARSQ15046 597 aaKnown RBP23.65■■□□□ 1.38
DDX39A-215ENST00000590696 ZNF852Q6ZMS4 543 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 LEMD2Q8NC56 503 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 RASSF8Q8NHQ8 419 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 RAD54LQ92698 747 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 SMARCD2Q92925 531 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 FAM212AQ96EL1 285 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 PGLYRP2Q96PD5 576 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 TRMT61BQ9BVS5 477 aaKnown RBP23.65■■□□□ 1.38
DDX39A-215ENST00000590696 OXCT2Q9BYC2 517 aaPredicted RBP23.65■■□□□ 1.38
DDX39A-215ENST00000590696 ZHX3Q9H4I2 956 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 ASAH2Q9NR71 780 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 FBXO4Q9UKT5 387 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 YIPF1Q9Y548 306 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 CACNA1IQ9P0X4 2223 aa23.65■■□□□ 1.38
DDX39A-215ENST00000590696 PPEF2O14830 753 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 NCAM2O15394 837 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 VNN2O95498 520 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 BMP15O95972 392 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
DDX39A-215ENST00000590696 ADRB2P07550 413 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 EPHA5P54756 1037 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 ZNF528Q3MIS6 628 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 CLDN23Q96B33 292 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 TSPAN18Q96SJ8 248 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 MSTO1Q9BUK6 570 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 MRPS17Q9Y2R5 130 aaKnown RBP23.64■■□□□ 1.37
DDX39A-215ENST00000590696 FANCMQ8IYD8 2048 aa23.64■■□□□ 1.37
DDX39A-215ENST00000590696 PATJQ8NI35 1801 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 A0A0B4J269 797 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 OR6C75A6NL08 312 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 SHISA7A6NL88 538 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 CSTF1Q05048 431 aaKnown RBP23.63■■□□□ 1.37
DDX39A-215ENST00000590696 SF3A1Q15459 793 aaKnown RBP23.63■■□□□ 1.37
DDX39A-215ENST00000590696 SPATA1Q5VX52 437 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 JADE1Q6IE81 842 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 SLC39A4Q6P5W5 647 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 VITQ6UXI7 678 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 BRAPQ7Z569 592 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 CD302Q8IX05 232 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 FIZ1Q96SL8 496 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 CRISPLD1Q9H336 500 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 CPSF3Q9UKF6 684 aaKnown RBP23.63■■□□□ 1.37
DDX39A-215ENST00000590696 SPTBN4Q9H254 2564 aa23.63■■□□□ 1.37
DDX39A-215ENST00000590696 KINO60870 393 aaKnown RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 TBCAO75347 108 aaKnown RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 PSMC3P17980 439 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 TYMPP19971 482 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 NMT1P30419 496 aaKnown RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 GDI1P31150 447 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 VIPR2P41587 438 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 RPS9P46781 194 aaKnown RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 LILRA4P59901 499 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 GTF2BQ00403 316 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 FOXK2Q01167 660 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 DUSP4Q13115 394 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 GPR17Q13304 367 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 PLD1Q13393 1074 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 FZD5Q13467 585 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 TEAD2Q15562 447 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 OVOS1Q6IE37 1185 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 ZSCAN18Q8TBC5 510 aaPredicted RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 LARP4BQ92615 738 aaKnown RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 IRF7Q92985 503 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 HINFPQ9BQA5 517 aa23.62■■□□□ 1.37
DDX39A-215ENST00000590696 ZNF334Q9HCZ1 680 aaPredicted RBP23.62■■□□□ 1.37
DDX39A-215ENST00000590696 WDR87Q6ZQQ6 2873 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 ANKRD63C9JTQ0 380 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 MAP4K3Q8IVH8 894 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 KIAA2013Q8IYS2 634 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 SUMF1Q8NBK3 374 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 SHKBP1Q8TBC3 707 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 SENP8Q96LD8 212 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 LRRC3Q9BY71 257 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 GPR88Q9GZN0 384 aa23.61■■□□□ 1.37
DDX39A-215ENST00000590696 SLITRK6Q9H5Y7 841 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms