RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 NECTIN4Q96NY8 510 aa19.73■□□□□ 0.75
DDX39A-212ENST00000590260 KCTD10Q9H3F6 313 aa19.73■□□□□ 0.75
DDX39A-212ENST00000590260 MUTYHQ9UIF7 546 aa19.73■□□□□ 0.75
DDX39A-212ENST00000590260 NOTCH4Q99466 2003 aa19.73■□□□□ 0.75
DDX39A-212ENST00000590260 OAZ2O95190 189 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 SEC24AO95486 1093 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 MYL1P05976 194 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 KNOP1Q1ED39 458 aaKnown RBP19.72■□□□□ 0.75
DDX39A-212ENST00000590260 OR5B17Q8NGF7 314 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 PLEKHO2Q8TD55 490 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 NOC3LQ8WTT2 800 aaKnown RBP19.72■□□□□ 0.75
DDX39A-212ENST00000590260 DOCK6Q96HP0 2047 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 SENP8Q96LD8 212 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 RTP3Q9BQQ7 232 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 PRKD2Q9BZL6 878 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 EXOC1Q9NV70 894 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 ZDHHC7Q9NXF8 308 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 SIX4Q9UIU6 781 aa19.72■□□□□ 0.75
DDX39A-212ENST00000590260 KIAA0391O15091 583 aaKnown RBP19.71■□□□□ 0.75
DDX39A-212ENST00000590260 RHOBTB3O94955 611 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 C8AP07357 584 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 OR4Q2P0C623 313 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 TFAMQ00059 246 aaKnown RBP19.71■□□□□ 0.75
DDX39A-212ENST00000590260 CTXN3Q4LDR2 81 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 NT5DC4Q86YG4 428 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 C12orf56Q8IXR9 622 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 ZNF461Q8TAF7 563 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 SLC7A14Q8TBB6 771 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 SMG7Q92540 1137 aaKnown RBP19.71■□□□□ 0.75
DDX39A-212ENST00000590260 TMEM209Q96SK2 561 aa19.71■□□□□ 0.75
DDX39A-212ENST00000590260 WDR6Q9NNW5 1121 aaKnown RBP19.71■□□□□ 0.75
DDX39A-212ENST00000590260 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.71■□□□□ 0.75
DDX39A-212ENST00000590260 GADD45BO75293 160 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-212ENST00000590260 ITGB3P05106 788 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 CYP2J2P51589 502 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 ARPP19P56211 112 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 NTHL1P78549 312 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 PSMD2Q13200 908 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 DSTYKQ6XUX3 929 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 RDH13Q8NBN7 331 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 APPL2Q8NEU8 664 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 MTMR12Q9C0I1 747 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 CRISPLD1Q9H336 500 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 DMAC2Q9NW81 257 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 CIZ1Q9ULV3 898 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-212ENST00000590260 TRIOO75962 3097 aa19.7■□□□□ 0.74
DDX39A-212ENST00000590260 ZNF233A6NK53 670 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 H7C4K7 107 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 NRG2O14511 850 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 CCL16O15467 120 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 CYP11A1P05108 521 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 TYMPP19971 482 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 POLR2BP30876 1174 aaKnown RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 SNRPFP62306 86 aaKnown RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 YWHAHQ04917 246 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 PNOCQ13519 176 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 SNRNP35Q16560 246 aaKnown RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 ZNF280DQ6N043 979 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 POTEHQ6S545 545 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 CYP26C1Q6V0L0 522 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 RNF19BQ6ZMZ0 732 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 OR10T2Q8NGX3 314 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 ZNF516Q92618 1163 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 ERCC4Q92889 916 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-212ENST00000590260 TSHZ2Q9NRE2 1034 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 INTS13Q9NVM9 706 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 HCFC1R1Q9NWW0 138 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 DPP7Q9UHL4 492 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 CLUHO75153 1309 aa19.69■□□□□ 0.74
DDX39A-212ENST00000590260 FAM86C2PA6NEL3 165 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 DCXO43602 365 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 ATF2P15336 505 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 HOXA9P31269 272 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 TAF6P49848 677 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 CYP24A1Q07973 514 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 CCDC149Q6ZUS6 474 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 XXYLT1Q8NBI6 393 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 MFSD14AQ96MC6 490 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 MYADMQ96S97 322 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 AGAP1Q9UPQ3 857 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 USTQ9Y2C2 406 aa19.68■□□□□ 0.74
DDX39A-212ENST00000590260 ARHGEF37A1IGU5 675 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 KPNA7A9QM74 516 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 HNRNPA1P09651 372 aaKnown RBP eCLIP19.67■□□□□ 0.74
DDX39A-212ENST00000590260 CASP4P49662 377 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 FAM160A1Q05DH4 1040 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 KCNB1Q14721 858 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 PSMD6Q15008 389 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 PPM1LQ5SGD2 360 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 LIN9Q5TKA1 542 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 WSCD1Q658N2 575 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 OVOS1Q6IE37 1185 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 GRASPQ7Z6J2 395 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-212ENST00000590260 TCEAL8Q8IYN2 117 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 SMYD4Q8IYR2 804 aaPredicted RBP19.67■□□□□ 0.74
DDX39A-212ENST00000590260 ZDHHC14Q8IZN3 488 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 TMEM174Q8WUU8 243 aa19.67■□□□□ 0.74
DDX39A-212ENST00000590260 SMOC2Q9H3U7 446 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms