RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 USP17L17D6RBQ6 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L19D6RCP7 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L20D6RJB6 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ALBP02768 609 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 KCNQ4P56696 695 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L24Q0WX57 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 RASA2Q15283 850 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L6PQ6QN14 398 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 NDUFAF2Q8N183 169 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF184Q99676 751 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 EIF2AK1Q9BQI3 630 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 SLC24A2Q9UI40 661 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 DENND3A2RUS2 1198 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 TNFAIP8O95379 198 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 P4HBP07237 508 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 STX5Q13190 355 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 INAQ16352 499 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 MIGA2Q7L4E1 593 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 TMEM120AQ9BXJ8 343 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 FSD1LQ9BXM9 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 TBC1D22BQ9NU19 505 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ARHGEF37A1IGU5 675 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 KCNN4O15554 427 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 IFNA8P32881 189 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 C4orf22Q6V702 233 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 LPCAT2Q7L5N7 544 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 PATL1Q86TB9 770 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 MAGEC3Q8TD91 643 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 CNDP1Q96KN2 507 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM111AQ96PZ2 611 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 DLGAP3O95886 979 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 KBTBD12Q3ZCT8 623 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF772Q68DY9 489 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 FRA10AC1Q70Z53 315 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ATG9AQ7Z3C6 839 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 BRD8Q9H0E9 1235 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 RAB6BQ9NRW1 208 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 PI4KBQ9UBF8 816 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 CPSF3Q9UKF6 684 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 ABLIM1O14639 778 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 GSTT1P30711 240 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 STAT3P40763 770 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 NUDT2P50583 147 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 RUNX1T1Q06455 604 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SFSWAPQ12872 951 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 EHD4Q9H223 541 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 A1CFQ9NQ94 594 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 PTENP60484 403 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 FOXO4P98177 505 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 PCNX4Q63HM2 1172 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 COMMD3-BMI1R4GMX3 469 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 OVOS2A0A0G2JMS6 1433 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SPRP35270 261 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 UGP2Q16851 508 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 IMPG1Q17R60 797 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 NOD1Q9Y239 953 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM153BP0C7A2 387 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 VCAM1P19320 739 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 TCN1P20061 433 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 SIK1P57059 783 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM153CQ494X1 144 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 NT5DC1Q5TFE4 455 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 PLEKHA7Q6IQ23 1121 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 TSEN2Q8NCE0 465 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 CPVLQ9H3G5 476 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 ARHGAP20Q9P2F6 1191 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 GTF3C4Q9UKN8 822 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 TMEM247A6NEH6 219 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 APRTP07741 180 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 IYDQ6PHW0 289 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 B3GNT6Q6ZMB0 384 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 MICU2Q8IYU8 434 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 MREGQ8N565 214 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF280CQ8ND82 737 aa15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 FRMD8P1Q9BZ68 369 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 DMAP1Q9NPF5 467 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-214ENST00000589677 TRIM49D1C9J1S8 452 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 RIPK2O43353 540 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 USP1O94782 785 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ZC3H12BQ5HYM0 836 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF677Q86XU0 584 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 TNIP2Q8NFZ5 429 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 HDAC7Q8WUI4 952 aa15.29■□□□□ 0.04
SMARCA4-214ENST00000589677 PPP1R36Q96LQ0 422 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms