RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ROR1Q01973 937 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
RFX1-204ENST00000588885 CYP26C1Q6V0L0 522 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 GLIS3Q8NEA6 775 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 APPL2Q8NEU8 664 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 FAM213AQ9BRX8 229 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 MFSD1Q9H3U5 465 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
RFX1-204ENST00000588885 WDR27A2RRH5 827 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
RFX1-204ENST00000588885 NARSO43776 548 aaKnown RBP12.52□□□□□ -0.41
RFX1-204ENST00000588885 TBC1D4O60343 1298 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 XYLBO75191 536 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 SEC24AO95486 1093 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 HNRNPA1P09651 372 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFX1-204ENST00000588885 OR4Q2P0C623 313 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CYP3A5P20815 502 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CMA1P23946 247 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CASP1P29466 404 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 LRPAP1P30533 357 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 NDUFA8P51970 172 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 PTPN5P54829 565 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 ASIC1P78348 528 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 MRPL58Q14197 206 aaKnown RBP12.52□□□□□ -0.41
RFX1-204ENST00000588885 E2F4Q16254 413 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 IER5LQ5T953 404 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
RFX1-204ENST00000588885 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 IQUBQ8NA54 791 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 ZNF461Q8TAF7 563 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 BLZF1Q9H2G9 400 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CYP4F11Q9HBI6 524 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
RFX1-204ENST00000588885 CITO14578 2027 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 SPTLC1O15269 473 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
RFX1-204ENST00000588885 ABLIM3O94929 683 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 ADRB2P07550 413 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 RFX1P22670 979 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 VCPP55072 806 aaKnown RBP12.51□□□□□ -0.41
RFX1-204ENST00000588885 WNT7BP56706 349 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 LILRA4P59901 499 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 TDGQ13569 410 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 POSTNQ15063 836 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 UVSSAQ2YD98 709 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 ZNF280DQ6N043 979 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
RFX1-204ENST00000588885 BMP8AQ7Z5Y6 402 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 USP37Q86T82 979 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 CD302Q8IX05 232 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 GRAMD1CQ8IYS0 662 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 ITFG1Q8TB96 612 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 ING5Q8WYH8 240 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 OLFML3Q9NRN5 406 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.415e-8■□□□□ 9.3
RFX1-204ENST00000588885 TMEM63CQ9P1W3 806 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 EPS15L1Q9UBC2 864 aa12.51□□□□□ -0.41
RFX1-204ENST00000588885 DNMT3BQ9UBC3 853 aaKnown RBP12.51□□□□□ -0.41
RFX1-204ENST00000588885 M0QZQ0 153 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 PAPLNO95428 1278 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 LRG1P02750 347 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 LAMP2P13473 410 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 CPB1P15086 417 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 AFMP43652 599 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 AMPD3Q01432 767 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 YWHAHQ04917 246 aaPredicted RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 ADCY1Q08828 1119 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 SNW1Q13573 536 aaKnown RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
RFX1-204ENST00000588885 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
RFX1-204ENST00000588885 SLC44A3Q8N4M1 653 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms