RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MRPL38Q96DV4 380 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CDX2Q99626 313 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 TCF25Q9BQ70 676 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 ENTPD7Q9NQZ7 604 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 MTMR10Q9NXD2 777 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 STK39Q9UEW8 545 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 PRRC2BQ5JSZ5 2229 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 FSCN2O14926 492 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 TRAPPC3O43617 180 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 HLA-DRAP01903 254 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CTSAP10619 480 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 TKTP29401 623 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 GLUD2P49448 558 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 MYL6P60660 151 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 TRPC3Q13507 836 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 PTPROQ16827 1216 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 USP41Q3LFD5 358 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CDKAL1Q5VV42 579 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 KRT39Q6A163 491 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 DSTYKQ6XUX3 929 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CEP57Q86XR8 500 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 DHX40Q8IX18 779 aaKnown RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 SENP8Q96LD8 212 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 GAS2L1Q99501 681 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 CHST7Q9NS84 486 aa20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 MAGEC2Q9UBF1 373 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLPTM1-209ENST00000588855 KPNA7A9QM74 516 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 KCNJ18B7U540 433 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 M0QZQ0 153 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 FGFR3P22607 806 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 PIK3CAP42336 1068 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 MTIF2P46199 727 aaKnown RBP20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 KCNJ12Q14500 433 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 IQCB1Q15051 598 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 LRSAM1Q6UWE0 723 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 TAS1R2Q8TE23 839 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 ELMO3Q96BJ8 720 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 HPDLQ96IR7 371 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 XYLT2Q9H1B5 865 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 HSD3B7Q9H2F3 369 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 CBX8Q9HC52 389 aa20.42■□□□□ 0.86
CLPTM1-209ENST00000588855 C2CD2LO14523 706 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 URODP06132 367 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 IGFBP4P22692 258 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 CA8P35219 290 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 FMO5P49326 533 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 MYL7Q01449 175 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 DSG1Q02413 1049 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 MYO1EQ12965 1108 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 MICAL1Q8TDZ2 1067 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 TTPALQ9BTX7 342 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 PCDHB8Q9UN66 801 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
CLPTM1-209ENST00000588855 LRRN2O75325 713 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 AFPP02771 609 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 PAX3P23760 479 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 EEF1GP26641 437 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 KCNH2Q12809 1159 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 SMC1AQ14683 1233 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 ZNF699Q32M78 642 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 TCP11X2Q5H9J9 407 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 KIAA0319Q5VV43 1072 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 KIAA1841Q6NSI8 718 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 SEMA4DQ92854 862 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 PI4K2AQ9BTU6 479 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 NGRNQ9NPE2 291 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 LMCD1Q9NZU5 365 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 TIMM13Q9Y5L4 95 aaPredicted RBP20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 SNX9Q9Y5X1 595 aa20.4■□□□□ 0.86
CLPTM1-209ENST00000588855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 HIDE1A8MVS5 230 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 CYB561D2O14569 222 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 SYN3O14994 580 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 CLSTN1O94985 981 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 CXCL14O95715 111 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 STAU1O95793 577 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 ODC1P11926 461 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 ATICP31939 592 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 ZNF445P59923 1031 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 MAN2A1Q16706 1144 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 PRSS55Q6UWB4 352 aaPredicted RBP20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 ADGRD2Q7Z7M1 963 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 FBXL13Q8NEE6 735 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 TUBGCP2Q9BSJ2 902 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 TSPY26PQ9H489 355 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 MRPL17Q9NRX2 175 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 GDAP2Q9NXN4 497 aa20.39■□□□□ 0.85
CLPTM1-209ENST00000588855 C2orf71A6NGG8 1288 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 SMTNL1A8MU46 457 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 N4BP1O75113 896 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 ZNF18P17022 549 aa20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 POU3F3P20264 500 aaPredicted RBP20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 VARS2Q5ST30 1063 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-209ENST00000588855 SPOPLQ6IQ16 392 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms